Computational modeling, formal analysis, and tools for systems biology
E Bartocci, P Lió - PLoS computational biology, 2016 - journals.plos.org
As the amount of biological data in the public domain grows, so does the range of modeling
and analysis techniques employed in systems biology. In recent years, a number of …
and analysis techniques employed in systems biology. In recent years, a number of …
Specification-based monitoring of cyber-physical systems: a survey on theory, tools and applications
Abstract The term Cyber-Physical Systems (CPS) typically refers to engineered, physical
and biological systems monitored and/or controlled by an embedded computational core …
and biological systems monitored and/or controlled by an embedded computational core …
A decision tree approach to data classification using signal temporal logic
G Bombara, CI Vasile, F Penedo, H Yasuoka… - Proceedings of the 19th …, 2016 - dl.acm.org
This paper introduces a framework for inference of timed temporal logic properties from data.
The dataset is given as a finite set of pairs of finite-time system traces and labels, where the …
The dataset is given as a finite set of pairs of finite-time system traces and labels, where the …
A survey of challenges for runtime verification from advanced application domains (beyond software)
Runtime verification is an area of formal methods that studies the dynamic analysis of
execution traces against formal specifications. Typically, the two main activities in runtime …
execution traces against formal specifications. Typically, the two main activities in runtime …
SpaTeL: a novel spatial-temporal logic and its applications to networked systems
I Haghighi, A Jones, Z Kong, E Bartocci… - Proceedings of the 18th …, 2015 - dl.acm.org
Networked dynamical systems are increasingly used as models for a variety of processes
ranging from robotic teams to collections of genetically engineered living cells. As the …
ranging from robotic teams to collections of genetically engineered living cells. As the …
[HTML][HTML] System design of stochastic models using robustness of temporal properties
Stochastic models such as Continuous-Time Markov Chains (CTMC) and Stochastic Hybrid
Automata (SHA) are powerful formalisms to model and to reason about the dynamics of …
Automata (SHA) are powerful formalisms to model and to reason about the dynamics of …
What is a trace? A runtime verification perspective
G Reger, K Havelund - … Symposium on Leveraging Applications of Formal …, 2016 - Springer
Abstract Runtime Monitoring or Verification deals with traces. In its most simple form a
monitoring system takes a trace produced by a system and a specification of correct …
monitoring system takes a trace produced by a system and a specification of correct …
First international competition on runtime verification: rules, benchmarks, tools, and final results of CRV 2014
The first international Competition on Runtime Verification (CRV) was held in September
2014, in Toronto, Canada, as a satellite event of the 14th international conference on …
2014, in Toronto, Canada, as a satellite event of the 14th international conference on …
Spatio-temporal model checking of vehicular movement in public transport systems
We present the use of a novel spatio-temporal model checker to detect problems in the data
and operation of a collective adaptive system. Data correctness is important to ensure …
and operation of a collective adaptive system. Data correctness is important to ensure …
Monitoring mobile and spatially distributed cyber-physical systems
Cyber-Physical Systems (CPS) consist of collaborative, networked and tightly intertwined
computational (logical) and physical components, each operating at different spatial and …
computational (logical) and physical components, each operating at different spatial and …