A brief multi-disciplinary review on antimicrobial resistance in medicine and its linkage to the global environmental microbiota

L Cantas, SQA Shah, LM Cavaco, CM Manaia… - Frontiers in …, 2013 - frontiersin.org
The discovery and introduction of antimicrobial agents to clinical medicine was one of the
greatest medical triumphs of the 20th century that revolutionized the treatment of bacterial …

The Card1 nuclease provides defence during type III CRISPR immunity

JT Rostøl, W Xie, V Kuryavyi, P Maguin, K Kao… - Nature, 2021 - nature.com
In the type III CRISPR–Cas immune response of prokaryotes, infection triggers the
production of cyclic oligoadenylates that bind and activate proteins that contain a CARF …

[图书][B] DNA and RNA modification enzymes: structure, mechanism, function and evolution

H Grosjean - 2009 - taylorfrancis.com
This volume is a timely and comprehensive description of the many facets of DNA and RNA
modification-editing processes and to some extent repair mechanisms. Each chapter offers …

Crystal structure and mechanism of action of the N6-methyladenine-dependent type IIM restriction endonuclease R. DpnI

W Siwek, H Czapinska, M Bochtler… - Nucleic acids …, 2012 - academic.oup.com
DNA methylation-dependent restriction enzymes have many applications in genetic
engineering and in the analysis of the epigenetic state of eukaryotic genomes. Nevertheless …

On the divalent metal ion dependence of DNA cleavage by restriction endonucleases of the EcoRI family

V Pingoud, W Wende, P Friedhoff, M Reuter… - Journal of molecular …, 2009 - Elsevier
Restriction endonucleases of the PD… D/EXK family need Mg2+ for DNA cleavage.
Whereas Mg2+ (or Mn2+) promotes catalysis, Ca2+ (without Mg2+) only supports DNA …

Structural basis for recognition of distinct deaminated DNA lesions by endonuclease Q

K Shi, NH Moeller, S Banerjee… - Proceedings of the …, 2021 - National Acad Sciences
Spontaneous deamination of DNA cytosine and adenine into uracil and hypoxanthine,
respectively, causes C to T and A to G transition mutations if left unrepaired. Endonuclease …

Crystal structure of the ββα-Me type II restriction endonuclease Hpy99I with target DNA

M Sokolowska, H Czapinska… - Nucleic acids research, 2009 - academic.oup.com
The ββα-Me restriction endonuclease (REase) Hpy99I recognizes the CGWCG target
sequence and cleaves it with unusual stagger (five nucleotide 5′-recessed ends). Here we …

The effect of a G: T mispair on the dynamics of DNA

P Imhof, M Zahran - PLoS One, 2013 - journals.plos.org
Distortions in the DNA sequence such as damages or mispairs are specifically recognized
and processed by DNA repair enzymes. A particular challenge for the enzymatic specificity …

[HTML][HTML] Unusual target site disruption by the rare-cutting HNH restriction endonuclease PacI

BW Shen, DF Heiter, SH Chan, H Wang, SY Xu… - Structure, 2010 - cell.com
The crystal structure of the rare-cutting HNH restriction endonuclease PacI in complex with
its eight-base-pair target recognition sequence 5′-TTAATTAA-3′ has been determined to …

Single-molecule fluorescence using nucleotide analogs: a proof-of-principle

EA Alemán, C De Silva, EM Patrick… - The Journal of …, 2014 - ACS Publications
Fluorescent nucleotide analogues, such as 2-aminopurine (2AP) and pyrrolo-C (PyC), have
been extensively used to study nucleic acid local conformational dynamics in bulk …