A modular XNAzyme cleaves long, structured RNAs under physiological conditions and enables allele-specific gene silencing

AI Taylor, CJK Wan, MJ Donde, SY Peak-Chew… - Nature …, 2022 - nature.com
Nucleic-acid catalysts (ribozymes, DNA-and XNAzymes) cleave target (m) RNAs with high
specificity but have shown limited efficacy in clinical applications. Here we report on the in …

[HTML][HTML] RNA-Independent Regulatory Functions of lncRNA in Complex Disease

M Kafida, M Karela, A Giakountis - Cancers, 2024 - mdpi.com
Simple Summary Recent studies highlight the complexity of long non-coding RNA (lncRNA)
genetic loci in the pathogenesis of complex diseases, including carcinogenesis and cancer …

The emerging roles of long noncoding RNAs in lymphatic vascular development and disease

KI Ivanov, OV Samuilova, AA Zamyatnin Jr - Cellular and Molecular Life …, 2023 - Springer
Recent advances in RNA sequencing technologies helped uncover what was once
uncharted territory in the human genome—the complex and versatile world of long …

RNA Oligomerisation without Added Catalyst from 2′, 3′‐Cyclic Nucleotides by Drying at Air‐Water Interfaces

AV Dass, S Wunnava, J Langlais… - …, 2023 - Wiley Online Library
For the emergence of life, the abiotic synthesis of RNA from its monomers is a central step.
We found that in alkaline, drying conditions in bulk and at heated air‐water interfaces, 2 …

Optimized periphery-core interface increases fitness of the Bacillus subtilis glmS ribozyme

LED Yu, EN White, SA Woodson - Nucleic Acids Research, 2024 - academic.oup.com
Like other functional RNAs, ribozymes encode a conserved catalytic center supported by
peripheral domains that vary among ribozyme sub-families. To understand how core …

Getting your money's worth: Testing the value of data for hydrological model calibration

J Seibert, FM Clerc‐Schwarzenbach… - Hydrological …, 2024 - Wiley Online Library
Despite the big data era, observational data continue to be a limiting factor in the
environmental sciences. To collect the most informative field data, studies on the value of …

Efficient synthesis and replication of diverse sequence libraries composed of biostable nucleic acid analogues

JRD Hervey, N Freund, G Houlihan, G Dhaliwal… - RSC Chemical …, 2022 - pubs.rsc.org
Functional nucleic acids can be evolved in vitro using cycles of selection and amplification,
starting from diverse-sequence libraries, which are typically restricted to natural or partially …

A single-vector intersectional AAV strategy for interrogating cellular diversity and brain function

AC Hughes, BG Pittman, B Xu, JW Gammons… - Nature …, 2024 - nature.com
As discovery of cellular diversity in the brain accelerates, so does the need for tools that
target cells based on multiple features. Here we developed Conditional Viral Expression by …

Identification of HDV-like theta ribozymes involved in tRNA-based recoding of gut bacteriophages

K Kienbeck, L Malfertheiner, S Zelger-Paulus… - Nature …, 2024 - nature.com
Trillions of microorganisms, collectively known as the microbiome, inhabit our bodies with
the gut microbiome being of particular interest in biomedical research. Bacteriophages, the …

RNA sequence to structure analysis from comprehensive pairwise mutagenesis of multiple self-cleaving ribozymes

JM Roberts, JD Beck, TB Pollock, DP Bendixsen… - Elife, 2023 - elifesciences.org
Self-cleaving ribozymes are RNA molecules that catalyze the cleavage of their own
phosphodiester backbones. These ribozymes are found in all domains of life and are also a …