Protein-protein interaction (PPI) network: recent advances in drug discovery

A Athanasios, V Charalampos, T Vasileios… - Current drug …, 2017 - benthamdirect.com
Background: The investigation of the cellular components, their interactions and related
functions constitute the major conditions in order to understand the cell as an integrated …

Herpesvirus capsid assembly and DNA packaging

JD Heming, JF Conway, FL Homa - Cell biology of herpes viruses, 2017 - Springer
Herpes simplex virus type I (HSV-1) is the causative agent of several pathologies ranging in
severity from the common cold sore to life-threatening encephalitic infection. During …

Tegument assembly and secondary envelopment of alphaherpesviruses

DJ Owen, CM Crump, SC Graham - Viruses, 2015 - mdpi.com
Alphaherpesviruses like herpes simplex virus are large DNA viruses characterized by their
ability to establish lifelong latent infection in neurons. As for all herpesviruses …

A hitchhiker's guide through the cell: the world according to the capsids of alphaherpesviruses

K Döhner, MC Serrero, A Viejo-Borbolla… - Annual Review of …, 2024 - annualreviews.org
The nucleoplasm, the cytosol, the inside of virions, and again the cytosol comprise the world
in which the capsids of alphaherpesviruses encounter viral and host proteins that support or …

Integrative network alignment reveals large regions of global network similarity in yeast and human

O Kuchaiev, N Pržulj - Bioinformatics, 2011 - academic.oup.com
Motivation: High-throughput methods for detecting molecular interactions have produced
large sets of biological network data with much more yet to come. Analogous to sequence …

Diversity in Genetic In Vivo Methods for Protein-Protein Interaction Studies: from the Yeast Two-Hybrid System to the Mammalian Split-Luciferase System

B Stynen, H Tournu, J Tavernier… - … and molecular biology …, 2012 - Am Soc Microbiol
The yeast two-hybrid system pioneered the field of in vivo protein-protein interaction
methods and undisputedly gave rise to a palette of ingenious techniques that are constantly …

HSV-1 cytoplasmic envelopment and egress

I Ahmad, DW Wilson - International journal of molecular sciences, 2020 - mdpi.com
Herpes simplex virus type 1 (HSV-1) is a structurally complex enveloped dsDNA virus that
has evolved to replicate in human neurons and epithelia. Viral gene expression, DNA …

The way out: what we know and do not know about herpesvirus nuclear egress

TC Mettenleiter, F Müller, H Granzow… - Cellular …, 2013 - Wiley Online Library
Herpesvirus capsids are assembled in the nucleus of infected cells whereas final maturation
occurs in the cytosol. To access the final maturation compartment, intranuclear capsids have …

NETAL: a new graph-based method for global alignment of protein–protein interaction networks

B Neyshabur, A Khadem, S Hashemifar… - Bioinformatics, 2013 - academic.oup.com
Motivation: The interactions among proteins and the resulting networks of such interactions
have a central role in cell biology. Aligning these networks gives us important information …

GRP23 plays a core role in E-type editosomes via interacting with MORFs and atypical PPR-DYWs in Arabidopsis mitochondria

YZ Yang, XY Liu, JJ Tang, Y Wang… - Proceedings of the …, 2022 - National Acad Sciences
Identifying the PPR-E+-NUWA-DYW2 editosome improves our understanding of the C-to-U
RNA editing in plant organelles. However, the mechanism of RNA editing remains to be …