Mutational drivers of cancer cell migration and invasion

NM Novikov, SY Zolotaryova, AM Gautreau… - British journal of …, 2021 - nature.com
Genomic instability and mutations underlie the hallmarks of cancer—genetic alterations
determine cancer cell fate by affecting cell proliferation, apoptosis and immune response …

Mechanisms of Polycomb group protein function in cancer

V Parreno, AM Martinez, G Cavalli - Cell research, 2022 - nature.com
Cancer arises from a multitude of disorders resulting in loss of differentiation and a stem cell-
like phenotype characterized by uncontrolled growth. Polycomb Group (PcG) proteins are …

GAERF: predicting lncRNA-disease associations by graph auto-encoder and random forest

QW Wu, JF Xia, JC Ni, CH Zheng - Briefings in bioinformatics, 2021 - academic.oup.com
Predicting disease-related long non-coding RNAs (lncRNAs) is beneficial to finding of new
biomarkers for prevention, diagnosis and treatment of complex human diseases. In this …

[HTML][HTML] The role of branched chain amino acids metabolic disorders in tumorigenesis and progression

J Wang, W Wang, F Zhu, Q Duan - Biomedicine & Pharmacotherapy, 2022 - Elsevier
Branched-chain amino acids (BCAAs) are essential amino acids in human bodies. They
have complex metabolic pathways and various metabolites. Both BCAAs and its metabolites …

The lncRNA BORG drives breast cancer metastasis and disease recurrence

AJ Gooding, B Zhang, FK Jahanbani, HL Gilmore… - Scientific reports, 2017 - nature.com
Long noncoding RNAs (lncRNAs) have emerged as potent regulators of breast cancer
development and progression, including the metastatic spread of disease. Through in silico …

[HTML][HTML] An efficient model selection for linear discriminant function-based recursive feature elimination

X Ding, F Yang, F Ma - Journal of Biomedical Informatics, 2022 - Elsevier
Abstract Model selection is an important issue in support vector machine-based recursive
feature elimination (SVM-RFE). However, performing model selection on a linear SVM-RFE …

Unbiased detection of driver mutations in extramammary Paget disease

Y Ishida, N Kakiuchi, K Yoshida, Y Inoue, H Irie… - Clinical Cancer …, 2021 - AACR
Abstract Purpose: Extramammary Paget disease (EMPD) is an uncommon skin malignancy
whose genetic alterations are poorly characterized. Previous reports identified mutations in …

Moving breast cancer therapy up a notch

EWJ Mollen, J Ient, VCG Tjan-Heijnen… - Frontiers in …, 2018 - frontiersin.org
Breast cancer is the second most common malignancy, worldwide. Treatment decisions are
based on tumor stage, histological subtype, and receptor expression and include …

Nucleoporin-93 reveals a common feature of aggressive breast cancers: robust nucleocytoplasmic transport of transcription factors

NB Nataraj, A Noronha, JS Lee, S Ghosh, HRM Raju… - Cell reports, 2022 - cell.com
By establishing multi-omics pipelines, we uncover overexpression and gene copy-number
alterations of nucleoporin-93 (NUP93), a nuclear pore component, in aggressive human …

The mutational landscape of the adult healthy parous and nulliparous human breast

B Cereser, A Yiu, N Tabassum, L Del Bel Belluz… - Nature …, 2023 - nature.com
The accumulation of somatic mutations in healthy human tissues has been extensively
characterized, but the mutational landscape of the healthy breast is still poorly understood …