B12-dependent radical SAM enzymes: Ever expanding structural and mechanistic diversity

A Benjdia, O Berteau - Current Opinion in Structural Biology, 2023 - Elsevier
In the last decade, B 12-dependent radical SAM enzymes have emerged as central
biocatalysts in the biosynthesis of a myriad of natural products. Notably, these enzymes …

Phylogenetic distribution and experimental characterization of corrinoid production and dependence in soil bacterial isolates

ZI Alvarez-Aponte, AM Govindaraju… - The ISME …, 2024 - academic.oup.com
Soil microbial communities impact carbon sequestration and release, biogeochemical
cycling, and agricultural yields. These global effects rely on metabolic interactions that …

Soil contribution to the cobalamin (vitamin B12) supply of terrestrial organisms

AM Jörgensen, RG Joergensen - Biology and Fertility of Soils, 2024 - Springer
Cobalamin (Vitamin B 12) is a cofactor for many enzymes, including those in bacteria,
archaea, algae, and mammals. In humans, cobalamin deficiency can lead to pernicious …

Soil microbial community response to corrinoids is shaped by a natural reservoir of vitamin B12

ZF Hallberg, AM Nicolas, ZI Alvarez-Aponte… - The ISME …, 2024 - academic.oup.com
Soil microbial communities perform critical ecosystem services through the collective
metabolic activities of numerous individual organisms. Most microbes use corrinoids, a …

Laboratory evolution of E. coli with a natural vitamin B12 analog reveals roles for cobamide uptake and adenosylation in methionine synthase-dependent growth

KC Mok, ZF Hallberg, RR Procknow… - Journal of …, 2025 - journals.asm.org
Bacteria encounter chemically similar nutrients in their environment, which impact their
growth in distinct ways. Among such nutrients are cobamides, the structurally diverse family …

Vitamin B12 analogues from gut microbes and diet differentially impact commensal propionate producers of the human gut

P Kundra, A Greppi, M Duppenthaler, S Plüss… - Frontiers in …, 2024 - frontiersin.org
To produce the health-associated metabolite propionate, gut microbes require vitamin B12
as a cofactor to convert succinate to propionate. B12 is sourced in the human gut from the …

Draft Genome Sequence of Pedococcus sp. Strain 5OH_020, Isolated from California Grassland Soil

MA Green, ZI Alvarez-Aponte, VV Trotter… - Microbiology …, 2023 - Am Soc Microbiol
The draft genome sequence of the soil bacterium Pedococcus sp. strain 5OH_020, isolated
on a natural cobalamin analog, comprises 4.4 Mbp, with 4,108 protein-coding genes. Its …

Vitamin B 12 variants structure soil microbial communities despite soil's vast reservoir of B 12.

ZF Hallberg, AM Nicolas, ZI Alvarez-Aponte… - Biorxiv: the Preprint …, 2024 - europepmc.org
Soil microbial communities perform critical ecosystem services through the collective
metabolic activities of numerous individual organisms. Most microbes use corrinoids, a …

Corrinoids as model nutrients to probe microbial interactions in a soil ecosystem

ME Taga - 2024 - osti.gov
Soil not only represents the physical surface of the earth, but is also a habitat for thousands
of species of microorganisms. Numerous species of bacteria and other microbes collectively …