Image processing and recognition for biological images

S Uchida - Development, growth & differentiation, 2013 - Wiley Online Library
This paper reviews image processing and pattern recognition techniques, which will be
useful to analyze bioimages. Although this paper does not provide their technical details, it …

Taking aim at moving targets in computational cell migration

P Masuzzo, M Van Troys, C Ampe, L Martens - Trends in cell biology, 2016 - cell.com
Cell migration is central to the development and maintenance of multicellular organisms.
Fundamental understanding of cell migration can, for example, direct novel therapeutic …

Global linking of cell tracks using the Viterbi algorithm

KEG Magnusson, J Jaldén, PM Gilbert… - IEEE transactions on …, 2014 - ieeexplore.ieee.org
Automated tracking of living cells in microscopy image sequences is an important and
challenging problem. With this application in mind, we propose a global track linking …

The frequent sampling of wound scratch assay reveals the “opportunity” window for quantitative evaluation of cell motility-impeding drugs

S Kauanova, A Urazbayev, I Vorobjev - Frontiers in cell and …, 2021 - frontiersin.org
Wound healing assay performed with automated microscopy is widely used in drug testing,
cancer cell analysis, and similar approaches. It is easy to perform, and the results are …

Understanding the phase contrast optics to restore artifact-free microscopy images for segmentation

Z Yin, T Kanade, M Chen - Medical image analysis, 2012 - Elsevier
Phase contrast, a noninvasive microscopy imaging technique, is widely used to capture time-
lapse images to monitor the behavior of transparent cells without staining or altering them …

Graphical model for joint segmentation and tracking of multiple dividing cells

M Schiegg, P Hanslovsky, C Haubold, U Koethe… - …, 2015 - academic.oup.com
Motivation: To gain fundamental insight into the development of embryos, biologists seek to
understand the fate of each and every embryonic cell. For the generation of cell tracks in …

Size uniformity of animal cells is actively maintained by a p38 MAPK-dependent regulation of G1-length

S Liu, MB Ginzberg, N Patel, M Hild, B Leung, Z Li… - Elife, 2018 - elifesciences.org
Animal cells within a tissue typically display a striking regularity in their size. To date, the
molecular mechanisms that control this uniformity are still unknown. We have previously …

Analysis of live cell images: Methods, tools and opportunities

TA Nketia, H Sailem, G Rohde, R Machiraju, J Rittscher - Methods, 2017 - Elsevier
Advances in optical microscopy, biosensors and cell culturing technologies have
transformed live cell imaging. Thanks to these advances live cell imaging plays an …

Microscopy cell segmentation via adversarial neural networks

A Arbelle, TR Raviv - 2018 IEEE 15th International Symposium …, 2018 - ieeexplore.ieee.org
We present a novel method for cell segmentation in microscopy images which is inspired by
the Generative Adversarial Neural Network (GAN) approach. Our framework is built on a pair …

MPM: Joint representation of motion and position map for cell tracking

J Hayashida, K Nishimura… - Proceedings of the IEEE …, 2020 - openaccess.thecvf.com
Conventional cell tracking methods detect multiple cells in each frame (detection) and then
associate the detection results in successive time-frames (association). Most cell tracking …