[HTML][HTML] Detection of SARS-CoV-2 variants by genomic analysis of wastewater samples in Israel
I Bar-Or, M Weil, V Indenbaum, E Bucris… - Science of The Total …, 2021 - Elsevier
Investigation of SARS-CoV-2 spread and identification of variants in sewers has been
demonstrated to accurately detect prevalence of viral strains and is advantageous to clinical …
demonstrated to accurately detect prevalence of viral strains and is advantageous to clinical …
[HTML][HTML] High-throughput sequencing of SARS-CoV-2 in wastewater provides insights into circulating variants
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) likely emerged from a
zoonotic spill-over event and has led to a global pandemic. The public health response has …
zoonotic spill-over event and has led to a global pandemic. The public health response has …
Direct comparison of RT-ddPCR and targeted amplicon sequencing for SARS-CoV-2 mutation monitoring in wastewater
Over the course of the COVID-19 pandemic, variants of SARS-CoV-2 have emerged that are
more contagious and more likely to cause breakthrough infections. Targeted amplicon …
more contagious and more likely to cause breakthrough infections. Targeted amplicon …
SARS-CoV-2 detection and genomic sequencing from hospital surface samples collected at UC Davis
Rationale There is little doubt that aerosols play a major role in the transmission of SARS-
CoV-2. The significance of the presence and infectivity of this virus on environmental …
CoV-2. The significance of the presence and infectivity of this virus on environmental …
[HTML][HTML] High-resolution within-sewer SARS-CoV-2 surveillance facilitates informed intervention
K Reeves, J Liebig, A Feula, T Saldi, E Lasda… - Water Research, 2021 - Elsevier
To assist in the COVID-19 public health guidance on a college campus, daily composite
wastewater samples were withdrawn at 20 manhole locations across the University of …
wastewater samples were withdrawn at 20 manhole locations across the University of …
High throughput sequencing based direct detection of SARS-CoV-2 fragments in wastewater of Pune, West India
Given a large number of SARS-CoV-2 infected individuals, clinical detection has proved
challenging. The wastewater-based epidemiological paradigm would cover the clinically …
challenging. The wastewater-based epidemiological paradigm would cover the clinically …
[HTML][HTML] Inferring transmission fitness advantage of SARS-CoV-2 variants of concern from wastewater samples using digital PCR, Switzerland, December 2020 …
L Caduff, D Dreifuss, T Schindler, AJ Devaux… - …, 2022 - eurosurveillance.org
Background Throughout the COVID-19 pandemic, SARS-CoV-2 genetic variants of concern
(VOCs) have repeatedly and independently arisen. VOCs are characterised by increased …
(VOCs) have repeatedly and independently arisen. VOCs are characterised by increased …
Early detection of SARS-CoV-2 Omicron BA. 4 and BA. 5 in German wastewater
A Wilhelm, S Agrawal, J Schoth, C Meinert-Berning… - Viruses, 2022 - mdpi.com
Wastewater-based SARS-CoV-2 epidemiology (WBE) has been established as an important
tool to support individual testing strategies. The Omicron sub-variants BA. 4/BA. 5 have …
tool to support individual testing strategies. The Omicron sub-variants BA. 4/BA. 5 have …
Evaluation of a bioaerosol sampler for indoor environmental surveillance of Severe Acute Respiratory Syndrome Coronavirus 2
The worldwide spread of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2)
has ubiquitously impacted many aspects of life. As vaccines continue to be manufactured …
has ubiquitously impacted many aspects of life. As vaccines continue to be manufactured …
Using strain-resolved analysis to identify contamination in metagenomics data
Background Metagenomics analyses can be negatively impacted by DNA contamination.
While external sources of contamination such as DNA extraction kits have been widely …
While external sources of contamination such as DNA extraction kits have been widely …