Rational design of microRNA-responsive switch for programmable translational control in mammalian cells

H Ning, G Liu, L Li, Q Liu, H Huang, Z Xie - Nature Communications, 2023 - nature.com
Artificial RNA translation modulation usually relies on multiple components, such as RNA
binding proteins (RBPs) or microRNAs (miRNAs) for off-switches and double-inverter …

Multi-layered computational gene networks by engineered tristate logics

J Shao, X Qiu, L Zhang, S Li, S Xue, Y Si, Y Li, J Jiang… - Cell, 2024 - cell.com
So far, biocomputation strictly follows traditional design principles of digital electronics,
which could reach their limits when assembling gene circuits of higher complexity. Here, by …

Synthetic biology approaches for improving the specificity and efficacy of cancer immunotherapy

B Zhu, H Yin, D Zhang, M Zhang, X Chao… - Cellular & Molecular …, 2024 - nature.com
Immunotherapy has shown robust efficacy in treating a broad spectrum of hematological and
solid cancers. Despite the transformative impact of immunotherapy on cancer treatment …

[HTML][HTML] Biocomputing at the crossroad between emulating artificial intelligence and cellular supremacy

X Qiu, L Zhu, H Wang, M Xie - Current Opinion in Biotechnology, 2025 - Elsevier
Highlights•Biocomputation refers to regulation of gene expression with machine-like
precision.•Computational networks can comprise single or multiple layers of regulation …

[HTML][HTML] Improved anti-hepatocellular carcinoma effect by enhanced Co-delivery of Tim-3 siRNA and sorafenib via multiple pH triggered drug-eluting nanoparticles

C Song, J Zhang, R Wen, Q Li, J Zhou, Z Wu, Y Lv… - Materials Today Bio, 2022 - Elsevier
Effective systemic treatment for hepatocellular carcinoma (HCC) remains urgently needed.
Sorafenib is the first FDA-approved systemic treatment for HCC. However, individual HCC …

Gene delivery to breast cancer by incorporated EpCAM targeted DARPins into AAV2

Y Lv, H Zhang, Z Cui, C Ma, Y Li, H Lu, H Wu, J Yang… - BMC cancer, 2023 - Springer
Objective The aim of this study is to evaluate an AAV vector that can selectively target breast
cancer cells and to investigate its specificity and anti-tumor effects on breast cancer cells …

AC099850. 3 promotes HBV-HCC cell proliferation and invasion through regulating CD276: a novel strategy for sorafenib and immune checkpoint combination …

A He, Z Huang, Q Feng, S Zhang, F Li, D Li… - Journal of Translational …, 2024 - Springer
Background This study investigates the molecular mechanisms of CC@ AC&SF@ PP NPs
loaded with AC099850. 3 siRNA and sorafenib (SF) for improving hepatitis B virus-related …

scRNAseq and High-Throughput Spatial Analysis of Tumor and Normal Microenvironment in Solid Tumors Reveal a Possible Origin of Circulating Tumor Hybrid Cells

AM Ali, A Raza - Cancers, 2024 - mdpi.com
Simple Summary This study explored a potentially significant player in the spread of
metastatic cancer:“hybrid cells”(HCs) combining features of both epithelial (common in …

Quantitative design of cell type-specific mRNA stability from microRNA expression data

L Oesinghaus, S Castillo-Hair, N Ludwig, A Keller… - bioRxiv, 2024 - biorxiv.org
Limiting expression to target cell types is a longstanding goal in gene therapy, which could
be met by sensing endogenous microRNA. However, an unclear association between …

Immunosuppression and phenotypic plasticity in an atlas of human hepatocholangiocarcinoma

Y Li, Z Xun, J Long, H Sun, X Yang… - Hepatobiliary …, 2024 - pmc.ncbi.nlm.nih.gov
Background Hepatocholangiocarcinoma (H-ChC) has the clinicopathological features of
both hepatocellular carcinoma (HCC) and intrahepatic cholangiocarcinoma (iCCA) and is a …