Immune responses in influenza A virus and human coronavirus infections: an ongoing battle between the virus and host

J Zheng, S Perlman - Current opinion in virology, 2018 - Elsevier
Highlights•Host immune responses play both protective and pathogenic roles in IAV and
CoV infections.•Synergy of adaptive and innate immunity is required for efficient control of …

HiTIMED: hierarchical tumor immune microenvironment epigenetic deconvolution for accurate cell type resolution in the tumor microenvironment using tumor-type …

Z Zhang, JK Wiencke, KT Kelsey, DC Koestler… - Journal of translational …, 2022 - Springer
Background Cellular compositions of solid tumor microenvironments are heterogeneous,
varying across patients and tumor types. High-resolution profiling of the tumor …

Pandemic H1N1 influenza A viruses suppress immunogenic RIPK3-driven dendritic cell death

BM Hartmann, RA Albrecht, E Zaslavsky… - Nature …, 2017 - nature.com
The risk of emerging pandemic influenza A viruses (IAVs) that approach the devastating
1918 strain motivates finding strain-specific host–pathogen mechanisms. During infection …

Research trends and hotspots on global influenza and inflammatory response based on bibliometrics

H Li, Y Zong, J Li, Z Zhou, Y Chang, W Shi, J Guo - Virology Journal, 2024 - Springer
The influenza virus is considered as a kind of significant zoonotic infectious disease
identified to date, with severe infections in humans characterized by excessive inflammation …

Histone deacetylase 2 is a component of influenza A virus-induced host antiviral response

PT Nagesh, M Hussain, HD Galvin… - Frontiers in …, 2017 - frontiersin.org
Host cells produce variety of antiviral factors that create an antiviral state and target various
stages of influenza A virus (IAV) life cycle to inhibit infection. However, IAV has evolved …

A single-stranded oligonucleotide inhibits toll-like receptor 3 activation and reduces influenza A (H1N1) infection

C Poux, A Dondalska, J Bergenstråhle… - Frontiers in …, 2019 - frontiersin.org
The initiation of an immune response is dependent on the activation and maturation of
dendritic cells after sensing pathogen associated molecular patterns by pattern recognition …

FUNNEL-GSEA: FUNctioNal ELastic-net regression in time-course gene set enrichment analysis

Y Zhang, DJ Topham, J Thakar, X Qiu - Bioinformatics, 2017 - academic.oup.com
Motivation Gene set enrichment analyses (GSEAs) are widely used in genomic research to
identify underlying biological mechanisms (defined by the gene sets), such as Gene …

Executable pathway analysis using ensemble discrete-state modeling for large-scale data

R Palli, MG Palshikar, J Thakar - PLoS computational biology, 2019 - journals.plos.org
Pathway analysis is widely used to gain mechanistic insights from high-throughput omics
data. However, most existing methods do not consider signal integration represented by …

Swine MicroRNAs ssc-miR-221-3p and ssc-miR-222 Restrict the Cross-Species Infection of Avian Influenza Virus

J Song, H Sun, H Sun, Z Jiang, J Zhu, C Wang… - Journal of …, 2020 - Am Soc Microbiol
Avian influenza virus (AIV) can cross species barriers to infect humans and other mammals.
However, these species-cross transmissions are most often dead-end infections due to host …

[HTML][HTML] Caspase-mediated degradation of host cortactin that promotes influenza A virus infection in epithelial cells

DY Chen, M Husain - Virology, 2016 - Elsevier
Influenza A virus (IAV) is well-known to exploit host factors to its advantage. Here, we report
that IAV exploits host cortactin, an actin filament-stabilising protein for infection in epithelial …