Ribosome Biogenesis in the Yeast Saccharomyces cerevisiae

JL Woolford Jr, SJ Baserga - Genetics, 2013 - academic.oup.com
Ribosomes are highly conserved ribonucleoprotein nanomachines that translate information
in the genome to create the proteome in all cells. In yeast these complex particles contain …

Post-transcriptional regulatory functions of mammalian pumilio proteins

AC Goldstrohm, TMT Hall, KM McKenney - TRENDS in Genetics, 2018 - cell.com
Mammalian Pumilio proteins, PUM1 and PUM2, are members of the PUF family of sequence-
specific RNA-binding proteins. In this review, we explore their mechanisms, regulatory …

Landscape of the complete RNA chemical modifications in the human 80S ribosome

M Taoka, Y Nobe, Y Yamaki, K Sato… - Nucleic acids …, 2018 - academic.oup.com
During ribosome biogenesis, ribosomal RNAs acquire various chemical modifications that
ensure the fidelity of translation, and dysregulation of the modification processes can cause …

Yeast Kre33 and human NAT10 are conserved 18S rRNA cytosine acetyltransferases that modify tRNAs assisted by the adaptor Tan1/THUMPD1

S Sharma, JL Langhendries, P Watzinger… - Nucleic acids …, 2015 - academic.oup.com
The function of RNA is subtly modulated by post-transcriptional modifications. Here, we
report an important crosstalk in the covalent modification of two classes of RNAs. We …

Dynamics of ribosome scanning and recycling revealed by translation complex profiling

SK Archer, NE Shirokikh, TH Beilharz, T Preiss - Nature, 2016 - nature.com
Regulation of messenger RNA translation is central to eukaryotic gene expression control.
Regulatory inputs are specified by the mRNA untranslated regions (UTRs) and often target …

[HTML][HTML] A translation-like cycle is a quality control checkpoint for maturing 40S ribosome subunits

BS Strunk, MN Novak, CL Young, K Karbstein - Cell, 2012 - cell.com
Assembly factors (AFs) prevent premature translation initiation on small (40S) ribosomal
subunit assembly intermediates by blocking ligand binding. However, it is unclear how AFs …

Rational association of genes with traits using a genome-scale gene network for Arabidopsis thaliana

I Lee, B Ambaru, P Thakkar, EM Marcotte… - Nature …, 2010 - nature.com
We introduce a rational approach for associating genes with plant traits by combined use of
a genome-scale functional network and targeted reverse genetic screening. We present a …

Genotype to phenotype: lessons from model organisms for human genetics

B Lehner - Nature Reviews Genetics, 2013 - nature.com
To what extent can variation in phenotypic traits such as disease risk be accurately predicted
in individuals? In this Review, I highlight recent studies in model organisms that are relevant …

Does functional specialization of ribosomes really exist?

MB Ferretti, K Karbstein - Rna, 2019 - rnajournal.cshlp.org
It has recently become clear that ribosomes are much more heterogeneous than previously
thought, with diversity arising from rRNA sequence and modifications, ribosomal protein …

Proofreading of pre-40S ribosome maturation by a translation initiation factor and 60S subunits

S Lebaron, C Schneider, RW Van Nues… - Nature structural & …, 2012 - nature.com
In the final steps of yeast ribosome synthesis, immature translation-incompetent pre-40S
particles that contain 20S pre-rRNA are converted to the mature translation-competent …