Highlighting membrane protein structure and function: A celebration of the Protein Data Bank

F Li, PF Egea, AJ Vecchio, I Asial, M Gupta… - Journal of Biological …, 2021 - ASBMB
Biological membranes define the boundaries of cells and compartmentalize the chemical
and physical processes required for life. Many biological processes are carried out by …

Structural basis for the modulation of voltage-gated sodium channels by animal toxins

H Shen, Z Li, Y Jiang, X Pan, J Wu… - Science, 2018 - science.org
INTRODUCTION Almost all venoms contain toxins that modulate the activity of voltage-gated
sodium (Nav) channels in order to incapacitate prey or predators. The single-chain …

Challenges and advances in atomistic simulations of potassium and sodium ion channel gating and permeation

KR DeMarco, S Bekker, I Vorobyov - The Journal of physiology, 2019 - Wiley Online Library
Ion channels are implicated in many essential physiological events such as electrical signal
propagation and cellular communication. The advent of K+ and Na+ ion channel structure …

Spider knottin pharmacology at voltage-gated sodium channels and their potential to modulate pain pathways

Y Dongol, FC Cardoso, RJ Lewis - Toxins, 2019 - mdpi.com
Voltage-gated sodium channels (NaVs) are a key determinant of neuronal signalling.
Neurotoxins from diverse taxa that selectively activate or inhibit NaV channels have helped …

[HTML][HTML] Mapping structural distribution and gating-property impacts of disease-associated mutations in voltage-gated sodium channels

AA Ahangar, E Elhanafy, H Blanton, J Li - Iscience, 2024 - cell.com
Thousands of voltage-gated sodium (Na v) channel variants contribute to a variety of
disorders, including epilepsy, cardiac arrhythmia, and pain disorders. Yet, the effects of more …

[HTML][HTML] GEO-Nav: A geometric dataset of voltage-gated sodium channels

A Raffo, U Fugacci, S Biasotti - Computers & Graphics, 2023 - Elsevier
Voltage-gated sodium (Nav) channels constitute a prime target for drug design and
discovery, given their implication in various diseases such as epilepsy, migraine and ataxia …

µ-Conotoxins modulating sodium currents in pain perception and transmission: A therapeutic potential

E Tosti, R Boni, A Gallo - Marine drugs, 2017 - mdpi.com
The Conus genus includes around 500 species of marine mollusks with a peculiar
production of venomous peptides known as conotoxins (CTX). Each species is able to …

Selective ligands and drug discovery targeting the voltage-gated sodium channel Nav1. 7

J Payandeh, DH Hackos - Voltage-gated Sodium Channels: Structure …, 2018 - Springer
The voltage-gated sodium (Nav) channel Nav1. 7 has been the focus of intense
investigation in recent years. Human genetics studies of individuals with gain-of-function …

Putative Spanner Function of the Vibrio PomB Plug Region in the Stator Rotation Model for Flagellar Motor

M Homma, H Terashima, H Koiwa… - Journal of …, 2021 - Am Soc Microbiol
Bacterial flagella are the best-known rotational organelles in the biological world. The spiral-
shaped flagellar filaments that extend from the cell surface rotate like a screw to create a …

Identifying a feasible transition pathway between two conformational states for a protein

Y Li, H Gong - Journal of Chemical Theory and Computation, 2022 - ACS Publications
Proteins usually need to transit between different conformational states to fulfill their
biological functions. In the mechanistic study of such transition processes by molecular …