Regulation of bacterial virulence by Csr (Rsm) systems
Most bacterial pathogens have the remarkable ability to flourish in the external environment
and in specialized host niches. This ability requires their metabolism, physiology, and …
and in specialized host niches. This ability requires their metabolism, physiology, and …
Specificity and nonspecificity in RNA–protein interactions
E Jankowsky, ME Harris - Nature reviews Molecular cell biology, 2015 - nature.com
To fully understand the regulation of gene expression, it is critical to quantitatively define
whether and how RNA-binding proteins (RBPs) discriminate between alternative binding …
whether and how RNA-binding proteins (RBPs) discriminate between alternative binding …
Global RNA recognition patterns of post‐transcriptional regulators Hfq and CsrA revealed by UV crosslinking in vivo
The molecular roles of many RNA‐binding proteins in bacterial post‐transcriptional gene
regulation are not well understood. Approaches combining in vivo UV crosslinking with RNA …
regulation are not well understood. Approaches combining in vivo UV crosslinking with RNA …
Global regulation by CsrA and its RNA antagonists
T Romeo, P Babitzke - Microbiology spectrum, 2018 - Am Soc Microbiol
The sequence-specific RNA binding protein CsrA is employed by diverse bacteria in the
posttranscriptional regulation of gene expression. Its binding interactions with RNA have …
posttranscriptional regulation of gene expression. Its binding interactions with RNA have …
Structural basis of the non-coding RNA RsmZ acting as a protein sponge
MicroRNA and protein sequestration by non-coding RNAs (ncRNAs) has recently generated
much interest. In the bacterial Csr/Rsm system, which is considered to be the most general …
much interest. In the bacterial Csr/Rsm system, which is considered to be the most general …
Diverse mechanisms and circuitry for global regulation by the RNA-binding protein CsrA
The carbon storage regulator (Csr) or repressor of stationary phase metabolites (Rsm)
system of Gammaproteobacteria is among the most complex and best-studied …
system of Gammaproteobacteria is among the most complex and best-studied …
RNA-binding proteins driving the regulatory activity of small non-coding RNAs in bacteria
Small non-coding RNAs (sRNAs) are critical post-transcriptional regulators of gene
expression. Distinct RNA-binding proteins (RBPs) influence the processing, stability and …
expression. Distinct RNA-binding proteins (RBPs) influence the processing, stability and …
Small RNAs, 5′ UTR elements and RNA-binding proteins in intracellular bacteria: impact on metabolism and virulence
G Oliva, T Sahr, C Buchrieser - FEMS microbiology reviews, 2015 - academic.oup.com
Sequencing-based studies have illuminated increased transcriptional complexity within the
genome structure of bacteria and have resulted in the identification of many small regulatory …
genome structure of bacteria and have resulted in the identification of many small regulatory …
Phloroglucinol Derivatives in Plant-Beneficial Pseudomonas spp.: Biosynthesis, Regulation, and Functions
Plant-beneficial Pseudomonas spp. aggressively colonize the rhizosphere and produce
numerous secondary metabolites, such as 2, 4-diacetylphloroglucinol (DAPG). DAPG is a …
numerous secondary metabolites, such as 2, 4-diacetylphloroglucinol (DAPG). DAPG is a …
ProNAB: database for binding affinities of protein–nucleic acid complexes and their mutants
Protein–nucleic acid interactions are involved in various biological processes such as gene
expression, replication, transcription, translation and packaging. The binding affinities of …
expression, replication, transcription, translation and packaging. The binding affinities of …