The current state of insect molecular systematics: a thriving Tower of Babel

MS Caterino, S Cho, FAH Sperling - Annual review of …, 2000 - annualreviews.org
▪ Abstract Insect molecular systematics has undergone remarkable recent growth. Advances
in methods of data generation and analysis have led to the accumulation of large amounts of …

Exploring the phylogenetic structure of ecological communities: an example for rain forest trees

CO Webb - The American Naturalist, 2000 - journals.uchicago.edu
Because of the correlation expected between the phylogenetic relatedness of two taxa and
their net ecological similarity, a measure of the overall phylogenetic relatedness of a …

TreeDyn: towards dynamic graphics and annotations for analyses of trees

F Chevenet, C Brun, AL Bañuls, B Jacq, R Christen - BMC bioinformatics, 2006 - Springer
Background Analyses of biomolecules for biodiversity, phylogeny or structure/function
studies often use graphical tree representations. Many powerful tree editors are now …

Empirical profile mixture models for phylogenetic reconstruction

L Si Quang, O Gascuel, N Lartillot - Bioinformatics, 2008 - academic.oup.com
Motivation: Previous studies have shown that accounting for site-specific amino acid
replacement patterns using mixtures of stationary probability profiles offers a promising …

Homoplasy, homology, and the perceived special status of behavior in evolution

D Rendall, A Di Fiore - Journal of Human Evolution, 2007 - Elsevier
Evolutionary biologists tend to tread cautiously when considering how behavioral data might
be incorporated into phylogenetic analyses, largely because of the preconception that …

Does adding characters with missing data increase or decrease phylogenetic accuracy?

JJ Wiens - Systematic biology, 1998 - academic.oup.com
Missing data are a widely recognized nuisance factor in phylogenetic analyses, and the fear
of missing data may deter systematists from including characters that are highly incomplete …

Phylogeny of the Genus Cladonia s.lat. (Cladoniaceae, Ascomycetes) Inferred from Molecular, Morphological, and Chemical Data

S Stenroos, J Hyvönen, L Myllys, A Thell, T Ahti - Cladistics, 2002 - Wiley Online Library
Phylogenetic relationships within the genus Cladonia, including Cladina (Cladoniaceae,
Lecanoromycetes), were reconstructed based upon simultaneous analyses of DNA …

Phylogeny of extant nephilid orb‐weaving spiders (Araneae, Nephilidae): testing morphological and ethological homologies

M Kuntner, JA Coddington, G Hormiga - Cladistics, 2008 - Wiley Online Library
The Pantropical spider clade Nephilidae is famous for its extreme sexual size dimorphism,
for constructing the largest orb‐webs known, and for unusual sexual behaviors, which …

Thirty years of numerical taxonomy

PHA Sneath - Systematic Biology, 1995 - academic.oup.com
In this history of numerical taxonomy since the publication in 1963 of Sokal and Sneath's
Principles of Numerical Taxonomy, I include reminiscences of the reactions of biologists in …

Phylogeographic information systems: putting the geography into phylogeography

DM Kidd, MG Ritchie - Journal of Biogeography, 2006 - Wiley Online Library
Phylogeography is concerned with the observation, description and analysis of the spatial
distribution of genotypes and the inference of historical scenarios. In the past, the discipline …