A review of cell-based computational modeling in cancer biology

J Metzcar, Y Wang, R Heiland… - JCO clinical cancer …, 2019 - ascopubs.org
Cancer biology involves complex, dynamic interactions between cancer cells and their
tissue microenvironments. Single-cell effects are critical drivers of clinical progression …

In silico clinical trials: concepts and early adoptions

F Pappalardo, G Russo, FM Tshinanu… - Briefings in …, 2019 - academic.oup.com
Innovations in information and communication technology infuse all branches of science,
including life sciences. Nevertheless, healthcare is historically slow in adopting …

Agent-based modeling of morphogenetic systems: Advantages and challenges

CM Glen, ML Kemp, EO Voit - PLoS computational biology, 2019 - journals.plos.org
The complexity of morphogenesis poses a fundamental challenge to understanding the
mechanisms governing the formation of biological patterns and structures. Over the past …

Towards personalized computational oncology: from spatial models of tumour spheroids, to organoids, to tissues

A Karolak, DA Markov… - Journal of The …, 2018 - royalsocietypublishing.org
A main goal of mathematical and computational oncology is to develop quantitative tools to
determine the most effective therapies for each individual patient. This involves predicting …

Agent-based modeling and simulation in mathematics and biology education

EN Bodine, RM Panoff, EO Voit… - Bulletin of Mathematical …, 2020 - Springer
With advances in computing, agent-based models (ABMs) have become a feasible and
appealing tool to study biological systems. ABMs are seeing increased incorporation into …

Modeling mammary organogenesis from biological first principles: Cells and their physical constraints

M Montévil, L Speroni, C Sonnenschein… - Progress in biophysics …, 2016 - Elsevier
In multicellular organisms, relations among parts and between parts and the whole are
contextual and interdependent. These organisms and their cells are ontogenetically linked …

Biomechanical modelling of tumor growth with chemotherapeutic treatment: a review

J Xu, Y Wang, H Gomez, X Feng - Smart Materials and Structures, 2023 - iopscience.iop.org
The efficiency of chemotherapy in the treatment of cancer depends on the administration
schedule, such as dosage, timing and frequency, and the release control if self-assembled …

[HTML][HTML] A high-performance cellular automaton model of tumor growth with dynamically growing domains

J Poleszczuk, H Enderling - Applied mathematics, 2014 - ncbi.nlm.nih.gov
Tumor growth from a single transformed cancer cell up to a clinically apparent mass spans
many spatial and temporal orders of magnitude. Implementation of cellular automata …

A geometrically-constrained mathematical model of mammary gland ductal elongation reveals novel cellular dynamics within the terminal end bud

I Paine, A Chauviere, J Landua… - PLoS Computational …, 2016 - journals.plos.org
Mathematics is often used to model biological systems. In mammary gland development,
mathematical modeling has been limited to acinar and branching morphogenesis and …

Human breast tissue engineering in health and disease

MB Buchholz, DI Scheerman, R Levato… - EMBO Molecular …, 2024 - embopress.org
The human mammary gland represents a highly organized and dynamic tissue, uniquely
characterized by postnatal developmental cycles. During pregnancy and lactation, it …