JA da Costa-Nunes, D Noordermeer - Current Opinion in Structural Biology, 2023 - Elsevier
Mammalian chromosomes are organized at different length scales within the cell nucleus. Topologically Associating Domains (TADs) are structural units of 3D genome organization …
Polycomb group proteins have a critical role in silencing transcription during development. It is commonly proposed that Polycomb-dependent changes in genome folding, which …
A Goychuk, D Kannan… - Proceedings of the …, 2023 - National Acad Sciences
From proteins to chromosomes, polymers fold into specific conformations that control their biological function. Polymer folding has long been studied with equilibrium thermodynamics …
D Alonso-Gil, A Losada - Trends in Cell Biology, 2023 - cell.com
Cohesin folds the genome in dynamic chromatin loops and holds the sister chromatids together. NIPBL Scc2 is currently considered the cohesin loader, a role that may need …
Understanding the mechanisms governing the structure and dynamics of flexible polymers like chromosomes, especially the signatures of motor-driven active processes, is of great …
E Al-Jibury, JWD King, Y Guo, B Lenhard… - Nature …, 2023 - nature.com
The organisation of the genome in nuclear space is an important frontier of biology. Chromosome conformation capture methods such as Hi-C and Micro-C produce genome …
F Corsi, E Rusch, A Goloborodko - Current Opinion in Genetics & …, 2023 - Elsevier
Highlights•Cohesin loop extrusion is the key mechanism of 3D genome organization in interphase of vertebrates.•Models of loop extrusion infer locations and dynamics of cohesin …
B Chan, M Rubinstein - Proceedings of the National …, 2023 - National Acad Sciences
The active loop extrusion hypothesis proposes that chromatin threads through the cohesin protein complex into progressively larger loops until reaching specific boundary elements …
T Sabaté, B Lelandais, E Bertrand… - Nucleic Acids …, 2023 - academic.oup.com
Genome-wide chromosome conformation capture (Hi-C) has revealed the organization of chromatin into topologically associating domains (TADs) and loops, which are thought to …