cis-Regulatory Elements in Plant Development, Adaptation, and Evolution
cis-Regulatory elements encode the genomic blueprints that ensure the proper
spatiotemporal patterning of gene expression necessary for appropriate development and …
spatiotemporal patterning of gene expression necessary for appropriate development and …
Cis-regulatory sequences in plants: their importance, discovery, and future challenges
The identification and characterization of cis-regulatory DNA sequences and how they
function to coordinate responses to developmental and environmental cues is of paramount …
function to coordinate responses to developmental and environmental cues is of paramount …
PlantRegMap: charting functional regulatory maps in plants
With the goal of charting plant transcriptional regulatory maps (ie transcription factors (TFs),
cis-elements and interactions between them), we have upgraded the TF-centred database …
cis-elements and interactions between them), we have upgraded the TF-centred database …
Multiple levels of crosstalk in hormone networks regulating plant defense
N Aerts, M Pereira Mendes… - The Plant Journal, 2021 - Wiley Online Library
Plant hormones are essential for regulating the interactions between plants and their
complex biotic and abiotic environments. Each hormone initiates a specific molecular …
complex biotic and abiotic environments. Each hormone initiates a specific molecular …
Burning questions for a warming and changing world: 15 unknowns in plant abiotic stress
We present unresolved questions in plant abiotic stress biology as posed by 15 research
groups with expertise spanning eco-physiology to cell and molecular biology. Common …
groups with expertise spanning eco-physiology to cell and molecular biology. Common …
Generating specificity in genome regulation through transcription factor sensitivity to chromatin
Cell type-specific gene expression relies on transcription factors (TFs) binding DNA
sequence motifs embedded in chromatin. Understanding how motifs are accessed in …
sequence motifs embedded in chromatin. Understanding how motifs are accessed in …
AP2/ERF Transcription Factor Regulatory Networks in Hormone and Abiotic Stress Responses in Arabidopsis
Dynamic environmental changes such as extreme temperature, water scarcity and high
salinity affect plant growth, survival, and reproduction. Plants have evolved sophisticated …
salinity affect plant growth, survival, and reproduction. Plants have evolved sophisticated …
The transcriptional landscape of Arabidopsis thaliana pattern-triggered immunity
Plants tailor their metabolism to environmental conditions, in part through the recognition of
a wide array of self and non-self molecules. In particular, the perception of microbial or plant …
a wide array of self and non-self molecules. In particular, the perception of microbial or plant …
JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework
Abstract JASPAR (http://jaspar. genereg. net) is an open-access database of curated, non-
redundant transcription factor (TF)-binding profiles stored as position frequency matrices …
redundant transcription factor (TF)-binding profiles stored as position frequency matrices …
A cis-regulatory atlas in maize at single-cell resolution
Summary cis-regulatory elements (CREs) encode the genomic blueprints of spatiotemporal
gene expression programs enabling highly specialized cell functions. Using single-cell …
gene expression programs enabling highly specialized cell functions. Using single-cell …