A combining technique of rate law functions for a cost-effective reconfigurable biological simulator

H Yamada, N Iwanaga, Y Shibata… - … Conference on Field …, 2007 - ieeexplore.ieee.org
In order to simulate large scale biological models with a reconfigurable FPGA-based
biochemical simulator system, reduction of required resources are essential. This paper …

Automatic pipeline construction focused on similarity of rate law functions for an FPGA-based biochemical simulator

H Yamada, Y Ogawa, T Ooya, T Ishimori… - IPSJ Transactions on …, 2010 - jstage.jst.go.jp
For FPGA-based scientific simulation systems, hardware design technique that can reduce
required amount of hardware resources is a key issue, since the size of simulation target is …

A modular approach to heterogeneous biochemical model simulation on an FPGA

H Yamada, Y Osana, T Ishimori, T Ooya… - 2009 International …, 2009 - ieeexplore.ieee.org
Mathematical modeling and simulation of cellular systems are important processes in
modern life science, to understand the behavior of life as a system. Kinetic model of a …

Low power and massively parallel simulation of oscillatory biochemical networks on FPGA

S Le Thanh, N Lobato-Dauzier… - … Circuits and Systems …, 2019 - ieeexplore.ieee.org
Biological functions emerge from a multitude of chemical species woven into intricate
biochemical networks. It is crucial to compute the dynamics of a biochemical network from its …

[PDF][PDF] FPGA Implementation of RK4 based Van der Pol Oscillator

İ Koyuncu, P Erdoğmuş - researchgate.net
FPGA chips have quite high speed and capacity now. They are also used in several
disciplines. For high speed and performance required applications, FPGAs are of great …

[PDF][PDF] Short Biography

H Amano - Citeseer
Hideharu Amano received the Ph. D degree from Keio University, Japan in 1986 under Prof.
Hideo Aiso's supervision.. From 1985, he was a research associate of department of electric …

A datapath classification method for FPGA-based scientific application accelerator systems

Y Ogawa, T Ooya, Y Osana, M Yoshimi… - … Conference on Field …, 2010 - ieeexplore.ieee.org
Resource reduction design techniques play an important role to implement large-scale
FPGA-based accelerator systems in floating point applications since available resources on …

[引用][C] A Hardware Accelerator for Biochemical Simulations

Y Osana, M Yoshimi, Y Iwaoka, T Kojima, Y Nishikawa