BIOPEP database and other programs for processing bioactive peptide sequences
P Minkiewicz, J Dziuba, A Iwaniak… - Journal of AOAC …, 2008 - academic.oup.com
This review presents the potential for application of computational tools in peptide science
based on a sample BIOPEP database and program as well as other programs and …
based on a sample BIOPEP database and program as well as other programs and …
Prediction of protein submitochondria locations based on data fusion of various features of sequences
In this study, the predictors are developed for protein submitochondria locations based on
various features of sequences. Information about the submitochondria location for a …
various features of sequences. Information about the submitochondria location for a …
A protein fold classifier formed by fusing different modes of pseudo amino acid composition via PSSM
Protein function is related to its chemical reaction to the surrounding environment including
other proteins. On the other hand, this depends on the spatial shape and tertiary structure of …
other proteins. On the other hand, this depends on the spatial shape and tertiary structure of …
Chaperone function of two small heat shock proteins from maize
RD Klein, T Chidawanyika, HS Tims, T Meulia… - Plant Science, 2014 - Elsevier
Small heat shock proteins (sHsps) are molecular chaperones that protect cells from the
effect of heat and other stresses. Some sHsps are also expressed at specific stages of …
effect of heat and other stresses. Some sHsps are also expressed at specific stages of …
New amino acid indices based on residue network topology
Amino acid indices are useful tools in bioinformatics. With the appearance of novel theory
and technology, and the rapid increase of experimental data, building new indices to cope …
and technology, and the rapid increase of experimental data, building new indices to cope …
Distributions of amino acids suggest that certain residue types more effectively determine protein secondary structure
S Saraswathi, JL Fernández-Martínez… - Journal of molecular …, 2013 - Springer
Exponential growth in the number of available protein sequences is unmatched by the
slower growth in the number of structures. As a result, the development of efficient and fast …
slower growth in the number of structures. As a result, the development of efficient and fast …
Using classifier fusion techniques for protein secondary structure prediction
Classifier fusion techniques are gaining more popularity for their capability of improving the
accuracy achieved by individual classifiers. A common approach is to combine the …
accuracy achieved by individual classifiers. A common approach is to combine the …
[HTML][HTML] Network analysis of transcription factors for nuclear reprogramming into induced pluripotent stem cell using bioinformatics
C Chakraborty, SS Roy, MJ Hsu… - Cell Journal …, 2014 - ncbi.nlm.nih.gov
Objective: Research related to induce pluripotent stem (iPS) cell generation has increased
rapidly in recent years. Six transcription factors, namely OCT4, SOX2, C-MYC, KLF4 …
rapidly in recent years. Six transcription factors, namely OCT4, SOX2, C-MYC, KLF4 …
Distinctive attributes for predicted secondary structures at terminal sequences of non-classically secreted proteins from proteobacteria
I Kampenusa, P Zikmanis - Central European Journal of Biology, 2008 - Springer
C-and N-terminal sequences (64 amino acid residues each) of 89 non-classically secreted
type I, type III and type IV proteins (Swiss-Prot/TrEMBL) from proteobacteria were …
type I, type III and type IV proteins (Swiss-Prot/TrEMBL) from proteobacteria were …
Knowledge-based computational intelligence development for predicting protein secondary structures from sequences
In the postgenomic age, with the avalanche of protein sequences generated and relatively
slow progress in determining their structures by experiments, it is important to develop …
slow progress in determining their structures by experiments, it is important to develop …