Cells execute their functions through dynamic operations of biological networks. Dynamic
networks delineate the operation of biological networks in terms of temporal changes of …

Understanding the global abiotic stress response is an important stepping stone for the
development of universal stress tolerance in plants in the era of climate change. Although co …

An infection represents a highly dynamic process involving complex biological responses of
the host at many levels. To describe such processes at a global level, we recorded gene …

LASSO-driven inference in time and space Page 1 The Annals of Statistics 2021, Vol. 49, No.
3, 1702–1735 https://doi.org/10.1214/20-AOS2019 © Institute of Mathematical Statistics …

Staphylococcus aureus is the leading cause of bacterial skin infection. Once it overcomes
the epithelial barrier, it either remains locally controlled or spreads in the dermis causing soft …

Nuclear receptors (NRs) are important mediators of the information encoded in the chemical
structure of its corresponding ligand, as they interpret such information in the context of the …

Dynamic disease pathways are a combination of complex dynamical processes among bio-
molecules in a cell that leads to diseases. Network modeling of disease pathways considers …

Microarray experiments generate data sets containing valuable information on the gene
expression levels of millions of genes in the form of a set of biological samples. Inference of …

In Systems Biology, the complex relationships between different entities in the cells are
modeled and analyzed using networks. Towards this aim, a rich variety of gene regulatory …

Towards unraveling the influenza A (H1N1) immunome, this work aims at constructing the
murine host response pathway interactome. To accomplish that, an ensemble of dynamic …