Genetic effects of harvest on wild animal populations

FW Allendorf, PR England, G Luikart, PA Ritchie… - Trends in ecology & …, 2008 - cell.com
Human harvest of animals in the wild occurs in terrestrial and aquatic habitats throughout
the world and is often intense. Harvest has the potential to cause three types of genetic …

Gene mapping in the wild with SNPs: guidelines and future directions

J Slate, J Gratten, D Beraldi, J Stapley, M Hale… - Genetica, 2009 - Springer
One of the biggest challenges facing evolutionary biologists is to identify and understand
loci that explain fitness variation in natural populations. This review describes how genetic …

An empirical comparison of SNPs and microsatellites for parentage and kinship assignment in a wild sockeye salmon (Oncorhynchus nerka) population

L Hauser, M Baird, RAY Hilborn… - Molecular ecology …, 2011 - Wiley Online Library
Because of their high variability, microsatellites are still considered the marker of choice for
studies on parentage and kinship in wild populations. Nevertheless, single nucleotide …

Advances in molecular technology and their impact on fisheries genetics

L Hauser, JE Seeb - Fish and Fisheries, 2008 - Wiley Online Library
Although genetic approaches to questions in fisheries management have been very useful
in the past, they have encountered consistent hurdles despite the development of new …

Summer–fall distribution of stocks of immature sockeye salmon in the Bering Sea as revealed by single-nucleotide polymorphisms

C Habicht, LW Seeb, KW Myers… - Transactions of the …, 2010 - Taylor & Francis
We report stock composition estimates for immature (ocean-age. 1 and. 2) sockeye salmon
Oncorhynchus nerka distributed across the Bering Sea in late summer and fall. We establish …

Highly accurate SNP genotyping from historical and low‐quality samples

PA Morin, M McCarthy - Molecular Ecology Notes, 2007 - Wiley Online Library
Historical and other poor‐quality samples are often necessary for population genetics,
conservation, and forensics studies. Although there is a long history of using mtDNA from …

Large-scale parentage inference with SNPs: an efficient algorithm for statistical confidence of parent pair allocations

EC Anderson - Statistical Applications in Genetics and Molecular …, 2012 - degruyter.com
Advances in genotyping that allow tens of thousands of individuals to be genotyped at a
moderate number of single nucleotide polymorphisms (SNPs) permit parentage inference to …

Short reads and nonmodel species: exploring the complexities of next‐generation sequence assembly and SNP discovery in the absence of a reference genome

MV Everett, ED Grau, JE Seeb - Molecular ecology resources, 2011 - Wiley Online Library
How practical is gene and SNP discovery in a nonmodel species using short read
sequences? Next‐generation sequencing technologies are being applied to an increasing …

Signals of heterogeneous selection at an MHC locus in geographically proximate ecotypes of sockeye salmon

WA Larson, JE Seeb, TH Dann, DE Schindler… - Molecular …, 2014 - Wiley Online Library
The genes of the major histocompatibility complex (MHC) are an important component of the
vertebrate immune system and can provide insights into the role of pathogen‐mediated …

Spawning habitat and geography influence population structure and juvenile migration timing of sockeye salmon in the Wood River Lakes, Alaska

MT McGlauflin, DE Schindler, LW Seeb… - Transactions of the …, 2011 - Taylor & Francis
The strict homing of sockeye salmon Oncorhynchus nerka results in reproductively isolated
populations that often spawn in close proximity and share rearing habitat. High spawning …