Paramagnetic chemical probes for studying biological macromolecules

Q Miao, C Nitsche, H Orton, M Overhand… - Chemical …, 2022 - ACS Publications
Paramagnetic chemical probes have been used in electron paramagnetic resonance (EPR)
and nuclear magnetic resonance (NMR) spectroscopy for more than four decades. Recent …

NMR illuminates intrinsic disorder

HJ Dyson, PE Wright - Current opinion in structural biology, 2021 - Elsevier
Nuclear magnetic resonance (NMR) has long been instrumental in the characterization of
intrinsically disordered proteins (IDPs) and intrinsically disordered regions (IDRs). This …

Systematic identification of conditionally folded intrinsically disordered regions by AlphaFold2

TR Alderson, I Pritišanac, Đ Kolarić… - Proceedings of the …, 2023 - National Acad Sciences
The AlphaFold Protein Structure Database contains predicted structures for millions of
proteins. For the majority of human proteins that contain intrinsically disordered regions …

NMR methods for structural characterization of protein-protein complexes

JA Purslow, B Khatiwada, MJ Bayro… - Frontiers in molecular …, 2020 - frontiersin.org
Protein-protein interactions and the complexes thus formed are critical elements in a wide
variety of cellular events that require an atomic-level description to understand them in …

Multiple regulatory intrinsically disordered motifs control FOXO4 transcription factor binding and function

B Bourgeois, T Gui, D Hoogeboom, HG Hocking… - Cell Reports, 2021 - cell.com
Transcription factors harbor defined regulatory intrinsically disordered regions (IDRs), which
raises the question of how they mediate binding to structured co-regulators and modulate …

Recent advances in NMR protein structure prediction with ROSETTA

J Koehler Leman, G Künze - International Journal of Molecular Sciences, 2023 - mdpi.com
Nuclear magnetic resonance (NMR) spectroscopy is a powerful method for studying the
structure and dynamics of proteins in their native state. For high-resolution NMR structure …

[HTML][HTML] Solvent paramagnetic relaxation enhancement as a versatile method for studying structure and dynamics of biomolecular systems

AJ Lenard, FAA Mulder, T Madl - Progress in Nuclear Magnetic Resonance …, 2022 - Elsevier
Solvent paramagnetic relaxation enhancement (sPRE) is a versatile nuclear magnetic
resonance (NMR)-based method that allows characterization of the structure and dynamics …

FOXO4 interacts with p53 TAD and CRD and inhibits its binding to DNA

R Mandal, K Kohoutova, O Petrvalska… - Protein …, 2022 - Wiley Online Library
Transcription factor p53 protects cells against tumorigenesis when subjected to various
cellular stresses. Under these conditions, p53 interacts with transcription factor Forkhead …

[HTML][HTML] Probing surfaces in dynamic protein interactions

E Spreitzer, S Usluer, T Madl - Journal of molecular biology, 2020 - Elsevier
Proteins and their interactions control a plethora of biological functions and enable life.
Protein–protein interactions can be highly dynamic, involve proteins with different degrees of …

Current approaches for integrating solution NMR spectroscopy and small-angle scattering to study the structure and dynamics of biomolecular complexes

F Delhommel, F Gabel, M Sattler - Journal of molecular biology, 2020 - Elsevier
The study of complex and dynamic biomolecular assemblies is a key challenge in structural
biology and requires the use of multiple methodologies providing complementary spatial …