Predicting risk of obesity in overweight adults using interpretable machine learning algorithms

W Lin, S Shi, H Huang, J Wen, G Chen - Frontiers in Endocrinology, 2023 - frontiersin.org
Objective To screen for predictive obesity factors in overweight populations using an optimal
and interpretable machine learning algorithm. Methods This cross-sectional study was …

An application based on bioinformatics and machine learning for risk prediction of sepsis at first clinical presentation using transcriptomic data

S Shi, X Pan, L Zhang, X Wang, Y Zhuang, X Lin… - Frontiers in …, 2022 - frontiersin.org
Background: Linking genotypic changes to phenotypic traits based on machine learning
methods has various challenges. In this study, we developed a workflow based on …

On the ability of the LR method to detect bias when there is pedigree misspecification and lack of connectedness

AM Pardo, A Legarra, ZG Vitezica, NS Forneris… - Genetics Selection …, 2024 - Springer
Background Cross-validation techniques in genetic evaluations encounter limitations due to
the unobservable nature of breeding values and the challenge of validating estimated …

Ensemble learning for integrative prediction of genetic values with genomic variants

LL Gu, RQ Yang, ZY Wang, D Jiang, M Fang - BMC bioinformatics, 2024 - Springer
Background Whole genome variants offer sufficient information for genetic prediction of
human disease risk, and prediction of animal and plant breeding values. Many sophisticated …

[HTML][HTML] Genomic prediction model optimization for growth traits of olive flounder (Paralichthys olivaceus)

WKM Omeka, DS Liyanage, S Lee, HMV Udayantha… - Aquaculture …, 2024 - Elsevier
Genomic prediction (GP) has emerged an effective tool for addressing the many
shortcomings of traditional selective breeding, thereby enhancing the selection process. In …

Breeding value predictive accuracy for scarcely recorded traits in a Eucalyptus grandis breeding population using genomic selection and data on predictor traits

EJ Jurcic, PV Villalba, J Dutour, C Centurión… - Tree Genetics & …, 2023 - Springer
Genomic selection methods are particularly useful for traits that are difficult or expensive to
measure. We investigated the impact of using predictor growth traits and/or genomic …

[HTML][HTML] Comparison of linear mixed models for genetic feather score analysis in laying hens kept in recurrent testing facilities

T Osorio-Gallardo, P Bijma - Poultry Science, 2025 - Elsevier
Feather pecking, related feather damage, and mortality are crucial welfare and efficiency
traits in laying hens. When individuals are kept in sib groups, genetic analysis of feather …

Stacked generalization as a computational method for the genomic selection

S Kim, SH Chu, YJ Park, CY Lee - Frontiers in Genetics, 2024 - frontiersin.org
As genomic selection emerges as a promising breeding method for both plants and animals,
numerous methods have been introduced and applied to various real and simulated data …

Implications of accounting for marker-based population structure in the quantitative genetic evaluation of genetic parameters related to growth and wood properties in …

H Hayatgheibi, HR Hallingbäck, SO Lundqvist… - BMC Genomic …, 2024 - Springer
Background Forest geneticists typically use provenances to account for population
differences in their improvement schemes; however, the historical records of the imported …

Heritability estimates and predictive ability for pig meat quality traits using identity‐by‐state and identity‐by‐descent relationships in an F2 population

BK Angarita Barajas, RJC Cantet… - Journal of Animal …, 2023 - Wiley Online Library
Genomic relationships can be computed with dense genome‐wide genotypes through
different methods, either based on identity‐by‐state (IBS) or identity‐by‐descent (IBD). The …