Small RNA-omics for plant virus identification, virome reconstruction, and antiviral defense characterization

MM Pooggin - Frontiers in microbiology, 2018 - frontiersin.org
RNA interference (RNAi)-based antiviral defense generates small interfering RNAs that
represent the entire genome sequences of both RNA and DNA viruses as well as viroids …

Current overview on viroid–host interactions

CR Adkar‐Purushothama… - Wiley Interdisciplinary …, 2020 - Wiley Online Library
Viroids are one of the most enigmatic highly structured, circular, single‐stranded RNA
phytopathogens. Although they are not known to code for any peptide, viroids induce visible …

A viroid‐derived small interfering RNA targets bHLH transcription factor MdPIF1 to regulate anthocyanin biosynthesis in Malus domestica

Z Zhang, ZY Li, FJ Zhang, PF Zheng… - Plant, Cell & …, 2024 - Wiley Online Library
Fruit colour is a critical determinant for the appearance quality and commercial value of
apple fruits. Viroid‐induced dapple symptom severely affects the fruit coloration, however …

Symptomatic plant viroid infections in phytopathogenic fungi

S Wei, R Bian, IB Andika, E Niu, Q Liu… - Proceedings of the …, 2019 - National Acad Sciences
Viroids are pathogenic agents that have a small, circular noncoding RNA genome. They
have been found only in plant species; therefore, their infectivity and pathogenicity in other …

Virus and viroid-derived small RNAs as modulators of host gene expression: molecular insights into pathogenesis

SV Ramesh, S Yogindran, P Gnanasekaran… - Frontiers in …, 2021 - frontiersin.org
Virus-derived siRNAs (vsiRNAs) generated by the host RNA silencing mechanism are
effectors of plant's defense response and act by targeting the viral RNA and DNA in post …

Methylation in DNA, histone, and RNA during flowering under stress condition: A review

M Shi, C Wang, P Wang, M Zhang, W Liao - Plant Science, 2022 - Elsevier
Flowering is the most critical transition period in the whole lifecycle of plants, and it is a
highly sensitive period to stress. New combinations of temperature, drought stress, carbon …

[HTML][HTML] RNA silencing pathways in plant development and defense

N Kryovrysanaki, A James, M Tselika… - … International Journal of …, 2021 - ijdb.ehu.eus
RNA silencing refers to a conserved eukaryotic process and is regarded as one of the most
important processes in plants, with the ability to regulate gene expression both …

Progress in 50 years of viroid research—Molecular structure, pathogenicity, and host adaptation

T Sano - Proceedings of the Japan Academy, Series B, 2021 - jstage.jst.go.jp
Viroids are non-encapsidated, single-stranded, circular RNAs consisting of 246–434
nucleotides. Despite their non-protein-encoding RNA nature, viroids replicate autonomously …

An inside look into biological miniatures: Molecular mechanisms of viroids

S Venkataraman, U Badar, E Shoeb, G Hashim… - International journal of …, 2021 - mdpi.com
Viroids are tiny single-stranded circular RNA pathogens that infect plants. Viroids do not
encode any proteins, yet cause an assortment of symptoms. The following review describes …

Insights into potato spindle tuber viroid quasi-species from infection to disease

CR Adkar-Purushothama, F Bolduc, P Bru… - Frontiers in …, 2020 - frontiersin.org
Viroids are non-coding RNA plant pathogens that are characterized by their possession of a
high mutation level. Although the sequence heterogeneity in viroid infected plants is well …