When stiffness matters: mechanosensing in heart development and disease

R Gaetani, EA Zizzi, MA Deriu, U Morbiducci… - Frontiers in Cell and …, 2020 - frontiersin.org
During embryonic morphogenesis, the heart undergoes a complex series of cellular
phenotypic maturations (eg, transition of myocytes from proliferative to quiescent or …

Recent computational approaches on mechanical behavior of axonal cytoskeletal components of neuron: A Brief Review

MI Khan, F Hasan, KAHA Mahmud, A Adnan - Multiscale Science and …, 2020 - Springer
Axonal cytoskeletal components of neuron have been studied and modeled by using
different approaches. The axonal cytoskeleton comprises of microtubules (MTs), which …

Charge-dependent interactions of monomeric and filamentous actin with lipid bilayers

CFE Schroer, L Baldauf, L van Buren… - Proceedings of the …, 2020 - National Acad Sciences
The cytoskeletal protein actin polymerizes into filaments that are essential for the
mechanical stability of mammalian cells. In vitro experiments showed that direct interactions …

A mechanochemical model of actin filaments

ON Yogurtcu, JS Kim, SX Sun - Biophysical journal, 2012 - cell.com
In eukaryotic cells, actin filaments are involved in important processes such as motility,
division, cell shape regulation, contractility, and mechanosensation. Actin filaments are …

Multiscale impact of nucleotides and cations on the conformational equilibrium, elasticity and rheology of actin filaments and crosslinked networks

TC Bidone, T Kim, MA Deriu, U Morbiducci… - … and modeling in …, 2015 - Springer
Cells are able to respond to mechanical forces and deformations. The actin cytoskeleton, a
highly dynamic scaffolding structure, plays an important role in cell mechano-sensing. Thus …

Cell penetrating peptide adsorption on magnetite and silica surfaces: a computational investigation

G Grasso, MA Deriu, M Prat, L Rimondini… - The Journal of …, 2015 - ACS Publications
Magnetic nanoparticles (MNPs) represent one of the most promising materials as they can
act as a versatile platform in the field of bionanotechnology for enhanced imaging …

The role of structural polymorphism in driving the mechanical performance of the alzheimer's beta amyloid fibrils

G Grasso, M Rebella, U Morbiducci… - … in bioengineering and …, 2019 - frontiersin.org
Alzheimer's Disease (AD) is related with the abnormal aggregation of amyloid β-peptides
Aβ1− 40 and Aβ1− 42, the latter having a polymorphic character which gives rise to U-or S …

A coarse-grained multiscale model to simulate morphological changes of food-plant tissues undergoing drying

W Wijerathne, CM Rathnayaka, HCP Karunasena… - Soft matter, 2019 - pubs.rsc.org
Numerical modelling has emerged as a powerful and effective tool to study various dynamic
behaviours of biological matter. Such numerical modelling tools have contributed to the …

Insights into actin polymerization and nucleation using a coarse-grained model

BG Horan, AR Hall, D Vavylonis - Biophysical Journal, 2020 - cell.com
We studied actin filament polymerization and nucleation with molecular dynamics
simulations and a previously established coarse-grained model having each residue …

Coarse-Grain Model of Ultrarigid Polymer Rods Comprising Bifunctionally Linked Peptide Bundlemers

T Zhang, DB Yang, CJ Kloxin, DJ Pochan… - …, 2024 - ACS Publications
Computationally designed homotetrameric helical peptide bundles have been
functionalized at their N-termini to achieve supramolecular polymers, wherein individual …