Alternative polyadenylation of mRNA precursors

B Tian, JL Manley - Nature reviews Molecular cell biology, 2017 - nature.com
Alternative polyadenylation (APA) is an RNA-processing mechanism that generates distinct
3′ termini on mRNAs and other RNA polymerase II transcripts. It is widespread across all …

Alternative cleavage and polyadenylation: extent, regulation and function

R Elkon, AP Ugalde, R Agami - Nature Reviews Genetics, 2013 - nature.com
The 3′ end of most protein-coding genes and long non-coding RNAs is cleaved and
polyadenylated. Recent discoveries have revealed that a large proportion of these genes …

Alternative mRNA transcription, processing, and translation: insights from RNA sequencing

E de Klerk, P AC't Hoen - Trends in Genetics, 2015 - cell.com
The human transcriptome comprises> 80000 protein-coding transcripts and the estimated
number of proteins synthesized from these transcripts is in the range of 250000 to 1 million …

Ubiquitously transcribed genes use alternative polyadenylation to achieve tissue-specific expression

S Lianoglou, V Garg, JL Yang, CS Leslie… - Genes & …, 2013 - genesdev.cshlp.org
More than half of human genes use alternative cleavage and polyadenylation (ApA) to
generate mRNA transcripts that differ in the lengths of their 3′ untranslated regions (UTRs) …

Targeting mRNA processing as an anticancer strategy

J Desterro, P Bak-Gordon… - Nature Reviews Drug …, 2020 - nature.com
Discoveries in the past decade have highlighted the potential of mRNA as a therapeutic
target for cancer. Specifically, RNA sequencing revealed that, in addition to gene mutations …

Analysis of alternative cleavage and polyadenylation by 3′ region extraction and deep sequencing

M Hoque, Z Ji, D Zheng, W Luo, W Li, B You, JY Park… - Nature …, 2013 - nature.com
Alternative cleavage and polyadenylation (APA) generates diverse mRNA isoforms. We
developed 3′ region extraction and deep sequencing (3′ READS) to address mispriming …

Global analyses of the effect of different cellular contexts on microRNA targeting

JW Nam, OS Rissland, D Koppstein, C Abreu-Goodger… - Molecular cell, 2014 - cell.com
MicroRNA (miRNA) regulation clearly impacts animal development, but the extent to which
development—with its resulting diversity of cellular contexts—impacts miRNA regulation is …

Alternative cleavage and polyadenylation: the long and short of it

B Tian, JL Manley - Trends in biochemical sciences, 2013 - cell.com
Cleavage and polyadenylation (C/P) of nascent transcripts is essential for maturation of the
3′ ends of most eukaryotic mRNAs. Over the past three decades, biochemical studies have …

Alternative Polyadenylation: a new frontier in post transcriptional regulation

F Ren, N Zhang, L Zhang, E Miller, JJ Pu - Biomarker Research, 2020 - Springer
Polyadenylation of pre-messenger RNA (pre-mRNA) specific sites and termination of their
downstream transcriptions are signaled by unique sequence motif structures such as …

[HTML][HTML] Cellular stress alters 3′ UTR landscape through alternative polyadenylation and isoform-specific degradation

D Zheng, R Wang, Q Ding, T Wang, B Xie, L Wei… - Nature …, 2018 - nature.com
Most eukaryotic genes express alternative polyadenylation (APA) isoforms with different 3′
UTR lengths, production of which is influenced by cellular conditions. Here, we show that …