New software tools, databases, and resources in metabolomics: Updates from 2020

BB Misra - Metabolomics, 2021 - Springer
Background Precision medicine, space exploration, drug discovery to characterization of
dark chemical space of habitats and organisms, metabolomics takes a centre stage in …

Alterations of the rhizosphere soil microbial community composition and metabolite profiles of Zea mays by polyethylene-particles of different molecular weights

Q Fu, J Lai, X Ji, Z Luo, G Wu, X Luo - Journal of Hazardous Materials, 2022 - Elsevier
Polyethylene film is the most widely used plastic film in agricultural production activities, and
its depolymerization products are mainly polyethylene-particles (PE-particles) of different …

Overview of metabolomic analysis and the integration with multi-omics for economic traits in cattle

D Hao, J Bai, J Du, X Wu, B Thomsen, H Gao, G Su… - Metabolites, 2021 - mdpi.com
Metabolomics has been applied to measure the dynamic metabolic responses, to
understand the systematic biological networks, to reveal the potential genetic architecture …

Biological Interactions Mediate Soil Functions by Altering Rare Microbial Communities

YF Wang, JY Xu, ZL Liu, HL Cui, P Chen… - Environmental …, 2024 - ACS Publications
Soil microbes, the main driving force of terrestrial biogeochemical cycles, facilitate soil
organic matter turnover. However, the influence of the soil fauna on microbial communities …

A strategy for uncovering the serum metabolome by direct-infusion high-resolution mass spectrometry

X Sun, Z Jia, Y Zhang, X Zhao, C Zhao, X Lu, G Xu - Metabolites, 2023 - mdpi.com
Direct infusion nanoelectrospray high-resolution mass spectrometry (DI-nESI-HRMS) is a
promising tool for high-throughput metabolomics analysis. However, metabolite assignment …

Metabolomics bridging proteomics along metabolites/oncometabolites and protein modifications: paving the way toward integrative multiomics

S Nalbantoglu, A Karadag - Journal of Pharmaceutical and Biomedical …, 2021 - Elsevier
Abstract Systems biology adopted functional and integrative multiomics approaches enable
to discover the whole set of interacting regulatory components such as genes, transcripts …

Multi-country metabolic signature discovery for chicken health classification

JC Wolthuis, S Magnúsdóttir, E Stigter, YF Tang, J Jans… - Metabolomics, 2023 - Springer
Introduction To decrease antibiotic resistance, their use as growth promoters in the
agricultural sector has been largely abandoned. This may lead to decreased health due to …

A Metabolome Analysis and the Immunity of Phlomis purpurea against Phytophthora cinnamomi

D Neves, A Figueiredo, M Maia, E Laczko, MS Pais… - Plants, 2023 - mdpi.com
Phlomis purpurea grows spontaneously in the southern Iberian Peninsula, namely in cork
oak (Quercus suber) forests. In a previous transcriptome analysis, we reported on its …

Curcumin alleviates traumatic brain injury induced by gas explosion through modulating gut microbiota and suppressing the LPS/TLR4/MyD88/NF-κB pathway

X Dong, L Deng, Y Su, X Han, S Yao, W Wu… - … Science and Pollution …, 2024 - Springer
Gas explosions (GE) are a prevalent and widespread cause of traumatic brain injury (TBI) in
coal miners. However, the impact and mechanism of curcumin on GE-induced TBI in rats …

Effect of lactic acid bacteria by different concentrations of copper based on non-target metabolomic analysis

X Li, S Chen, L Zhao, X Zeng, Y Liu, C Li… - … Science and Pollution …, 2023 - Springer
Copper (Cu) is an essential element for mammals, but excess intake can have detrimental
health consequences. However, Cu is no longer present in the “Limit of Contaminants in …