Densoviruses (DVs) are single-stranded DNA viruses and exclusively happen in
invertebrates. Most of DVs reported in insects are pathogenic to their native hosts, however …

Virus circular RNAs (circRNA) have been reported to be extensively expressed and play
important roles in viral infections. Previously we build the first database of virus circRNAs …

Coronaviruses and influenza viruses have similarities and differences. In order to
comprehensively compare them, their genome sequencing data were examined by principal …

Assays detecting blood transcriptome changes are studied for infectious disease diagnosis.
Blood-based RNA alternative splicing (AS) events, which have not been well characterized …

Whole genome sequencing (WGS) datasets, usually generated for the investigation of the
individual animal genome, can be used for additional mining of the fraction of sequencing …

India has moved from an era of food shortages to a status of food self-sufficiency through
improved modern agricultural technologies and sustainable agricultural practices. However …

Viral metagenomics has contributed enormously to the characterization of a wide range of
viruses infecting animals of all phyla in the last decades. Among Neotropical primates …

Alternative splicing (AS) is necessary for viral proliferation in host cells and a critical
regulatory component of viral gene expression. Conventional RNA-seq approaches provide …

Davidia involucrata Baill. is a rare plant endemic to China. Its exclusive evolutionary position
and specific floral organs endow it with a high research value. However, a lack of genomic …

This chapter introduces a brief analytical framework on which transcriptome studies are
based, ie from millions of reads to biologically meaningful genes. The importance of high …