Explaining deep neural networks and beyond: A review of methods and applications

W Samek, G Montavon, S Lapuschkin… - Proceedings of the …, 2021 - ieeexplore.ieee.org
With the broader and highly successful usage of machine learning (ML) in industry and the
sciences, there has been a growing demand for explainable artificial intelligence (XAI) …

A hitchhiker's guide through the bio‐image analysis software universe

R Haase, E Fazeli, D Legland, M Doube, S Culley… - Febs …, 2022 - Wiley Online Library
Modern research in the life sciences is unthinkable without computational methods for
extracting, quantifying and visualising information derived from microscopy imaging data of …

DaXi—high-resolution, large imaging volume and multi-view single-objective light-sheet microscopy

B Yang, M Lange, A Millett-Sikking, X Zhao… - Nature …, 2022 - nature.com
The promise of single-objective light-sheet microscopy is to combine the convenience of
standard single-objective microscopes with the speed, coverage, resolution and gentleness …

Stabilizing transformer training by preventing attention entropy collapse

S Zhai, T Likhomanenko, E Littwin… - International …, 2023 - proceedings.mlr.press
Training stability is of great importance to Transformers. In this work, we investigate the
training dynamics of Transformers by examining the evolution of the attention layers. In …

Fiba: Frequency-injection based backdoor attack in medical image analysis

Y Feng, B Ma, J Zhang, S Zhao… - Proceedings of the …, 2022 - openaccess.thecvf.com
In recent years, the security of AI systems has drawn increasing research attention,
especially in the medical imaging realm. To develop a secure medical image analysis (MIA) …

[HTML][HTML] The abTEM code: transmission electron microscopy from first principles

J Madsen, T Susi - Open Research Europe, 2021 - ncbi.nlm.nih.gov
Simulation of transmission electron microscopy (TEM) images or diffraction patterns is often
required to interpret experimental data. Since nuclear cores dominate electron scattering …

Nuclear shell-model simulation in digital quantum computers

A Pérez-Obiol, AM Romero, J Menéndez, A Rios… - Scientific Reports, 2023 - nature.com
The nuclear shell model is one of the prime many-body methods to study the structure of
atomic nuclei, but it is hampered by an exponential scaling on the basis size as the number …

Learnable companding quantization for accurate low-bit neural networks

K Yamamoto - Proceedings of the IEEE/CVF conference on …, 2021 - openaccess.thecvf.com
Quantizing deep neural networks is an effective method for reducing memory consumption
and improving inference speed, and is thus useful for implementation in resource …

Software for dataset-wide XAI: from local explanations to global insights with Zennit, CoRelAy, and ViRelAy

CJ Anders, D Neumann, W Samek, KR Müller… - arXiv preprint arXiv …, 2021 - arxiv.org
Deep Neural Networks (DNNs) are known to be strong predictors, but their prediction
strategies can rarely be understood. With recent advances in Explainable Artificial …

Perceptive locomotion in rough terrain–online foothold optimization

F Jenelten, T Miki, AE Vijayan… - IEEE Robotics and …, 2020 - ieeexplore.ieee.org
Compared to wheeled vehicles, legged systems have a vast potential to traverse
challenging terrain. To exploit the full potential, it is crucial to tightly integrate terrain …