Single-neuron analysis of dendrites and axons reveals the network organization in mouse prefrontal cortex

L Gao, S Liu, Y Wang, Q Wu, L Gou, J Yan - Nature Neuroscience, 2023 - nature.com
The structures of dendrites and axons form the basis for the connectivity of neural network,
but their precise relationship at single-neuron level remains unclear. Here we report the …

From Analog to Digital Computing: Is Homo sapiens' Brain on Its Way to Become a Turing Machine?

A Danchin, AA Fenton - Frontiers in Ecology and Evolution, 2022 - frontiersin.org
The abstract basis of modern computation is the formal description of a finite state machine,
the Universal Turing Machine, based on manipulation of integers and logic symbols. In this …

CARLsim 6: an open source library for large-scale, biologically detailed spiking neural network simulation

L Niedermeier, K Chen, J Xing, A Das… - … Joint Conference on …, 2022 - ieeexplore.ieee.org
Mature simulation systems for Spiking Neural Networks (SNNs) become more relevant than
ever for understanding the brain and supporting neuromorphic computing. The CARL-sim …

Hippocampome. org 2.0 is a knowledge base enabling data-driven spiking neural network simulations of rodent hippocampal circuits

DW Wheeler, JD Kopsick, N Sutton, C Tecuatl… - Elife, 2024 - elifesciences.org
Hippocampome. org is a mature open-access knowledge base of the rodent hippocampal
formation focusing on neuron types and their properties. Previously, Hippocampome. org v1 …

An update to Hippocampome. org by integrating single-cell phenotypes with circuit function in vivo

A Sanchez-Aguilera, DW Wheeler, T Jurado-Parras… - PLoS …, 2021 - journals.plos.org
Understanding brain operation demands linking basic behavioral traits to cell-type specific
dynamics of different brain-wide subcircuits. This requires a system to classify the basic …

Prenatal PM2.5 exposure impairs spatial learning and memory in male mice offspring: from transcriptional regulation to neuronal morphogenesis

Y Hou, W Yan, L Guo, G Li, N Sang - Particle and Fibre Toxicology, 2023 - Springer
Background As one of the environmental risk factors for human health, atmospheric fine
particulate matter (PM2. 5) contributes to cognitive deterioration in addition to respiratory …

Multiscale modeling of neuronal dynamics in hippocampus CA1

F Tesler, RM Lorenzi, A Ponzi, C Casellato… - Frontiers in …, 2024 - frontiersin.org
The development of biologically realistic models of brain microcircuits and regions
constitutes currently a very relevant topic in computational neuroscience. One of the main …

Full-scale scaffold model of the human hippocampus CA1 area

D Gandolfi, J Mapelli, SMG Solinas… - Nature Computational …, 2023 - nature.com
The increasing availability of quantitative data on the human brain is opening new avenues
to study neural function and dysfunction, thus bringing us closer and closer to the …

Robust resting-state dynamics in a large-scale spiking neural network model of area CA3 in the mouse hippocampus

JD Kopsick, C Tecuatl, K Moradi, SM Attili… - Cognitive …, 2023 - Springer
Hippocampal area CA3 performs the critical auto-associative function underlying pattern
completion in episodic memory. Without external inputs, the electrical activity of this neural …

A realistic morpho-anatomical connection strategy for modelling full-scale point-neuron microcircuits

D Gandolfi, J Mapelli, S Solinas, R De Schepper… - Scientific Reports, 2022 - nature.com
The modeling of extended microcircuits is emerging as an effective tool to simulate the
neurophysiological correlates of brain activity and to investigate brain dysfunctions …