[HTML][HTML] Computing RF Tree Distance over Succinct Representations
AP Branco, C Vaz, AP Francisco - Algorithms, 2023 - mdpi.com
There are several tools available to infer phylogenetic trees, which depict the evolutionary
relationships among biological entities such as viral and bacterial strains in infectious …
relationships among biological entities such as viral and bacterial strains in infectious …
The Path-Label Reconciliation (PLR) Dissimilarity Measure for Gene Trees
A López Sánchez, JA Ramírez-Rafael… - … on Algorithms in …, 2024 - drops.dagstuhl.de
In this study, we investigate the problem of comparing gene trees reconciled with the same
species tree using a novel semi-metric, called the Path-Label Reconciliation (PLR) …
species tree using a novel semi-metric, called the Path-Label Reconciliation (PLR) …
Phylogenetic tree distance computation over succinct representations
AP Branco, C Vaz, AP Francisco - arXiv preprint arXiv:2312.14029, 2023 - arxiv.org
There are several tools available to infer phylogenetic trees, which depict the evolutionary
relationships among biological entities such as viral and bacterial strains in infectious …
relationships among biological entities such as viral and bacterial strains in infectious …
Phylogeny Reconstruction Using Derived Transition Features
Traditional, sequence alignment-based (AB) methods are time-consuming and show NP-
hard complexity for large sequences. That is why alignment-free (AF) approaches become …
hard complexity for large sequences. That is why alignment-free (AF) approaches become …
The k-Robinson–Foulds Dissimilarity Measures for Comparison of Labeled Trees
Understanding the mutational history of tumor cells is a critical endeavor in unraveling the
mechanisms that drive the onset and progression of cancer. Modeling tumor cell evolution …
mechanisms that drive the onset and progression of cancer. Modeling tumor cell evolution …
The K-Robinson Foulds Measures for Labeled Trees
Investigating the mutational history of tumor cells is important for understanding the
underlying mechanisms of cancer and its evolution. Now that the evolution of tumor cells is …
underlying mechanisms of cancer and its evolution. Now that the evolution of tumor cells is …