Molecular Mimicry: a Paradigm of Host-Microbe Coevolution Illustrated by Legionella

S Mondino, S Schmidt, C Buchrieser - MBio, 2020 - Am Soc Microbiol
Through coevolution with host cells, microorganisms have acquired mechanisms to avoid
the detection by the host surveillance system and to use the cell's supplies to establish …

Affinity and specificity of motif-based protein–protein interactions

Y Ivarsson, P Jemth - Current opinion in structural biology, 2019 - Elsevier
It is becoming increasingly clear that eukaryotic cell physiology is largely controlled by
protein–protein interactions involving disordered protein regions, which usually interact with …

ELM—the eukaryotic linear motif resource in 2020

M Kumar, M Gouw, S Michael… - Nucleic acids …, 2020 - academic.oup.com
Studies on the DNA-binding properties of transcription factors are important in searching for
the downstream genes regulated by these factors. In the present study, we report on the …

ELM 2016—data update and new functionality of the eukaryotic linear motif resource

H Dinkel, K Van Roey, S Michael, M Kumar… - Nucleic acids …, 2016 - academic.oup.com
Abstract The Eukaryotic Linear Motif (ELM) resource (http://elm. eu. org) is a manually
curated database of short linear motifs (SLiMs). In this update, we present the latest …

The eukaryotic linear motif resource–2018 update

M Gouw, S Michael, H Sámano-Sánchez… - Nucleic acids …, 2018 - academic.oup.com
Short linear motifs (SLiMs) are protein binding modules that play major roles in almost all
cellular processes. SLiMs are short, often highly degenerate, difficult to characterize and …

Large scale discovery of coronavirus-host factor protein interaction motifs reveals SARS-CoV-2 specific mechanisms and vulnerabilities

T Kruse, C Benz, DH Garvanska, R Lindqvist… - Nature …, 2021 - nature.com
Viral proteins make extensive use of short peptide interaction motifs to hijack cellular host
factors. However, most current large-scale methods do not identify this important class of …

[HTML][HTML] Microbial sources of amyloid and relevance to amyloidogenesis and Alzheimer's disease (AD)

Y Zhao, P Dua, WJ Lukiw - Journal of Alzheimer's disease & …, 2015 - ncbi.nlm.nih.gov
Since the inception of the human microbiome project (HMP) by the US National Institutes of
Health (NIH) in 2007 there has been a keen resurgence in our recognition of the human …

Discovery of short linear motif‐mediated interactions through phage display of intrinsically disordered regions of the human proteome

NE Davey, MH Seo, VK Yadav, J Jeon, S Nim… - The FEBS …, 2017 - Wiley Online Library
The intrinsically disordered regions of eukaryotic proteomes are enriched in short linear
motifs (SL iMs), which are of crucial relevance for cellular signaling and protein regulation; …

[HTML][HTML] How different viruses perturb host cellular machinery via short linear motifs

S Idrees, KR Paudel, T Sadaf, PM Hansbro - EXCLI journal, 2023 - ncbi.nlm.nih.gov
The virus interacts with its hosts by developing protein-protein interactions. Most viruses
employ protein interactions to imitate the host protein: A viral protein with the same amino …

The PGRS domain of Mycobacterium tuberculosis PE_PGRS protein Rv0297 is involved in endoplasmic reticulum stress-mediated apoptosis through toll-like receptor …

S Grover, T Sharma, Y Singh, S Kohli, MP, A Singh… - MBio, 2018 - Am Soc Microbiol
The genome of Mycobacterium tuberculosis, the causal organism of tuberculosis (TB),
encodes a unique protein family known as the PE/PPE/PGRS family, present exclusively in …