The impact of molecular dynamics on drug design: applications for the characterization of ligand–macromolecule complexes

J Mortier, C Rakers, M Bermudez, MS Murgueitio… - Drug discovery today, 2015 - Elsevier
Highlights•Which molecular dynamics (MD) techniques are available for drug design?•How
is MD used to investigate ligand–macromolecule complexes?•How are MD studies applied …

Recent advances in bioprobes and biolabels based on cyanine dyes

X Ma, L Shi, B Zhang, L Liu, Y Fu, X Zhang - Analytical and bioanalytical …, 2022 - Springer
As a functional dye, cyanine dye promotes the widespread application of bioprobes in the
fields of medicine, genetics and environment, owing to its advantages of good photophysical …

Recent developments in G-quadruplex probes

DL Ma, Z Zhang, M Wang, L Lu, HJ Zhong… - Chemistry & Biology, 2015 - cell.com
Accumulating evidence has linked G-quadruplex structures to a number of biological
processes in vivo, including DNA replication, transcription, and genomic maintenance …

Design of Modular G‐quadruplex Ligands

AR Duarte, E Cadoni, AS Ressurreição… - …, 2018 - Wiley Online Library
Guanine‐rich nucleic acid sequences able to form four‐stranded structures (G‐
quadruplexes, G4) play key cellular regulatory roles and are considered as promising drug …

Targeting G-quadruplex nucleic acids with heterocyclic alkaloids and their derivatives

YX Xiong, ZS Huang, JH Tan - European journal of medicinal chemistry, 2015 - Elsevier
G-Quadruplex nucleic acids or G-quadruplexes (G4s) are four-stranded DNA or RNA
secondary structures that are formed in guanine-rich sequences. They are widely distributed …

Natural alkaloids and heterocycles as G-quadruplex ligands and potential anticancer agents

T Che, YQ Wang, ZL Huang, JH Tan, ZS Huang… - Molecules, 2018 - mdpi.com
G-quadruplexes are four-stranded nucleic acid secondary structures that are formed in
guanine-rich sequences. G-quadruplexes are widely distributed in functional regions of the …

Discovery of novel schizocommunin derivatives as telomeric G-quadruplex ligands that trigger telomere dysfunction and the deoxyribonucleic acid (DNA) damage …

T Che, SB Chen, JL Tu, B Wang, YQ Wang… - Journal of Medicinal …, 2018 - ACS Publications
Telomeric G-quadruplex targeting and telomere maintenance interference are emerging as
attractive strategies for anticancer therapies. Here, a novel molecular scaffold is explored for …

Development of a new colorimetric and red-emitting fluorescent dual probe for G-quadruplex nucleic acids

JW Yan, SB Chen, HY Liu, WJ Ye, TM Ou… - Chemical …, 2014 - pubs.rsc.org
A tailor-made colorimetric and red-emitting fluorescent dual probe for G-quadruplex nucleic
acids was developed by incorporating a coumarin–hemicyanine fluorophore into an …

Design, synthesis and evaluation of isaindigotone derivatives as dual inhibitors for acetylcholinesterase and amyloid beta aggregation

JW Yan, YP Li, WJ Ye, SB Chen, JQ Hou… - Bioorganic & medicinal …, 2012 - Elsevier
A series of isaindigotone derivatives and analogues were designed, synthesized and
evaluated as dual inhibitors of cholinesterases (ChEs) and self-induced β-amyloid (Aβ) …

Synthesis and Evaluation of Quinazolone Derivatives as a New Class of c-KIT G-Quadruplex Binding Ligands

X Wang, CX Zhou, JW Yan, JQ Hou… - ACS medicinal …, 2013 - ACS Publications
The c-KIT G-quadruplex structures are a novel class of attractive targets for the treatment of
gastrointestinal stromal tumor (GIST). Herein, a series of new quinazolone derivatives with …