Transcription regulation and animal diversity

M Levine, R Tjian - Nature, 2003 - nature.com
Whole-genome sequence assemblies are now available for seven different animals,
including nematode worms, mice and humans. Comparative genome analyses reveal a …

The evolution of transcriptional regulation in eukaryotes

GA Wray, MW Hahn, E Abouheif… - Molecular biology …, 2003 - academic.oup.com
Gene expression is central to the genotype-phenotype relationship in all organisms, and it is
an important component of the genetic basis for evolutionary change in diverse aspects of …

Notch signalling in vertebrate neural development

A Louvi, S Artavanis-Tsakonas - Nature Reviews Neuroscience, 2006 - nature.com
Signals through the Notch receptors are used throughout development to control cellular
fate choices. Loss-and gain-of-function studies revealed both the pleiotropic action of the …

Genome-wide analysis of repressor element 1 silencing transcription factor/neuron-restrictive silencing factor (REST/NRSF) target genes

AW Bruce, IJ Donaldson, IC Wood… - Proceedings of the …, 2004 - National Acad Sciences
The completion of whole genome sequencing projects has provided the genetic instructions
of life. However, whereas the identification of gene coding regions has progressed, the …

Regulation of notch signaling activity

F Schweisguth - Current biology, 2004 - cell.com
Cell-cell signaling mediated by the receptor Notch is used widely across the metazoans to
determine cell fate and regulate pattern formation. Notch signals via a conserved regulated …

Genomic approaches towards finding cis-regulatory modules in animals

RC Hardison, J Taylor - Nature Reviews Genetics, 2012 - nature.com
Differential gene expression is the fundamental mechanism underlying animal development
and cell differentiation. However, it is a challenge to identify comprehensively and accurately …

Cluster-Buster: Finding dense clusters of motifs in DNA sequences

MC Frith, MC Li, Z Weng - Nucleic acids research, 2003 - academic.oup.com
The signals that determine activation and repression of specific genes in response to
appropriate stimuli are one of the most important, but least understood, types of information …

Notch signaling in leukemia

JC Aster, WS Pear, SC Blacklow - Annu. Rev. Pathol. Mech. Dis., 2008 - annualreviews.org
Recent discoveries indicate that gain-of-function mutations in the Notch1 receptor are very
common in human T cell acute lymphoblastic leukemia/lymphoma. This review discusses …

Crosstalk Between the EGFR and LIN-12/Notch Pathways in C. elegans Vulval Development

AS Yoo, C Bais, I Greenwald - Science, 2004 - science.org
The Caenorhabditis elegans vulva is an important paradigm for cell-cell interactions in
animal development. The fates of six vulval precursor cells are patterned through the action …

Transcriptional Control in the Segmentation Gene Network of Drosophila

MD Schroeder, M Pearce, J Fak, HQ Fan… - PLoS …, 2004 - journals.plos.org
The segmentation gene network of Drosophila consists of maternal and zygotic factors that
generate, by transcriptional (cross-) regulation, expression patterns of increasing complexity …