Challenges in analysis and interpretation of microsatellite data for population genetic studies

AI Putman, I Carbone - Ecology and evolution, 2014 - Wiley Online Library
Advancing technologies have facilitated the ever‐widening application of genetic markers
such as microsatellites into new systems and research questions in biology. In light of the …

How important is intraspecific genetic admixture to the success of colonising populations?

M Rius, JA Darling - Trends in ecology & evolution, 2014 - cell.com
Genetic admixture of divergent intraspecific lineages is increasingly suspected to have an
important role in the success of colonising populations. However, admixture is not a …

Clumpak: a program for identifying clustering modes and packaging population structure inferences across K

NM Kopelman, J Mayzel, M Jakobsson… - Molecular ecology …, 2015 - Wiley Online Library
The identification of the genetic structure of populations from multilocus genotype data has
become a central component of modern population‐genetic data analysis. Application of …

[HTML][HTML] RhierBAPS: an R implementation of the population clustering algorithm hierBAPS

G Tonkin-Hill, JA Lees, SD Bentley… - Wellcome open …, 2018 - ncbi.nlm.nih.gov
Identifying structure in collections of sequence data sets remains a common problem in
genomics. hierBAPS, a popular algorithm for identifying population structure in haploid …

CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure

M Jakobsson, NA Rosenberg - Bioinformatics, 2007 - academic.oup.com
Motivation: Clustering of individuals into populations on the basis of multilocus genotypes is
informative in a variety of settings. In population-genetic clustering algorithms, such as …

Beyond biodiversity: Can environmental DNA (eDNA) cut it as a population genetics tool?

CIM Adams, M Knapp, NJ Gemmell, GJ Jeunen… - Genes, 2019 - mdpi.com
Population genetic data underpin many studies of behavioral, ecological, and evolutionary
processes in wild populations and contribute to effective conservation management …

How race becomes biology: embodiment of social inequality

CC Gravlee - American journal of physical anthropology, 2009 - Wiley Online Library
The current debate over racial inequalities in health is arguably the most important venue for
advancing both scientific and public understanding of race, racism, and human biological …

INVITED REVIEW: What is a population? An empirical evaluation of some genetic methods for identifying the number of gene pools and their degree of connectivity

RS Waples, O Gaggiotti - Molecular ecology, 2006 - Wiley Online Library
We review commonly used population definitions under both the ecological paradigm
(which emphasizes demographic cohesion) and the evolutionary paradigm (which …

Detecting loci under selection in a hierarchically structured population

L Excoffier, T Hofer, M Foll - Heredity, 2009 - nature.com
Patterns of genetic diversity between populations are often used to detect loci under
selection in genome scans. Indeed, loci involved in local adaptations should show high F ST …

Enhanced Bayesian modelling in BAPS software for learning genetic structures of populations

J Corander, P Marttinen, J Sirén, J Tang - BMC bioinformatics, 2008 - Springer
Background During the most recent decade many Bayesian statistical models and software
for answering questions related to the genetic structure underlying population samples have …