Functional Annotation of Animal Genomes (FAANG): current achievements and roadmap

E Giuffra, CK Tuggle… - Annual review of animal …, 2019 - annualreviews.org
Functional annotation of genomes is a prerequisite for contemporary basic and applied
genomic research, yet farmed animal genomics is deficient in such annotation. To address …

[HTML][HTML] Derivation of intermediate pluripotent stem cells amenable to primordial germ cell specification

L Yu, Y Wei, HX Sun, AK Mahdi, CAP Arteaga… - Cell stem cell, 2021 - cell.com
Dynamic pluripotent stem cell (PSC) states are in vitro adaptations of pluripotency
continuum in vivo. Previous studies have generated a number of PSCs with distinct …

LncRNAs in domesticated animals: from dog to livestock species

S Lagarrigue, M Lorthiois, F Degalez, D Gilot… - Mammalian …, 2022 - Springer
Animal genomes are pervasively transcribed into multiple RNA molecules, of which many
will not be translated into proteins. One major component of this transcribed non-coding …

Genome-wide identification of tissue-specific long non-coding RNA in three farm animal species

C Kern, Y Wang, J Chitwood, I Korf, M Delany… - BMC genomics, 2018 - Springer
Background Numerous long non-coding RNAs (lncRNAs) have been identified and their
roles in gene regulation in humans, mice, and other model organisms studied; however, far …

A Gene Expression Atlas of the Domestic Water Buffalo (Bubalus bubalis)

R Young, L Lefevre, SJ Bush, A Joshi, SH Singh… - Frontiers in …, 2019 - frontiersin.org
The domestic water buffalo (Bubalus bubalis) makes a major contribution to the global
agricultural economy in the form of milk, meat, hides, and draught power. The global water …

miRNAs and lncRNAs in Echinococcus and Echinococcosis

Z He, T Yan, Y Yuan, D Yang, G Yang - International Journal of Molecular …, 2020 - mdpi.com
Echinococcosis are considered to be potentially lethal zoonotic diseases that cause serious
damage to hosts. The metacestode of Echinococcus multilocularis and E. granulosus can …

An integrative atlas of chicken long non-coding genes and their annotations across 25 tissues

F Jehl, K Muret, M Bernard, M Boutin, L Lagoutte… - Scientific reports, 2020 - nature.com
Long non-coding RNAs (LNC) regulate numerous biological processes. In contrast to
human, the identification of LNC in farm species, like chicken, is still lacunar. We propose a …

Cross-species inference of long non-coding RNAs greatly expands the ruminant transcriptome

SJ Bush, C Muriuki, MEB McCulloch… - Genetics Selection …, 2018 - Springer
Background mRNA-like long non-coding RNAs (lncRNAs) are a significant component of
mammalian transcriptomes, although most are expressed only at low levels, with high tissue …

Identification and comparative analysis of long non-coding RNA in the skeletal muscle of two dezhou donkey strains

T Shi, W Hu, H Hou, Z Zhao, M Shang, L Zhang - Genes, 2020 - mdpi.com
Long non-coding RNA (lncRNA) has been extensively studied in many livestock. However,
compared with other livestock breeds, there is less research regarding donkey lncRNA …

Adding exogenous biglycan or decorin improves tendon formation for equine peritenon and tendon proper cells in vitro

MY Pechanec, TN Boyd, K Baar… - BMC musculoskeletal …, 2020 - Springer
Background Tendon injuries amount to one of the leading causes of career-ending injuries
in horses due to the inability for tendon to completely repair and the high reinjury potential …