[HTML][HTML] Transposons: a blessing curse

MJ Dubin, OM Scheid, C Becker - Current opinion in plant biology, 2018 - Elsevier
Highlights•TEs are a key source of variation and have an important role in gene
regulation.•Stress induced activation of some TE families can result in new insertions.•New …

LTR-retrotransposons in plants: Engines of evolution

L Galindo-González, C Mhiri, MK Deyholos… - Gene, 2017 - Elsevier
LTR retrotransposons are the most abundant group of transposable elements (TEs) in
plants. These elements can fall inside or close to genes, and therefore influence their …

Genomic impact of stress-induced transposable element mobility in Arabidopsis

D Roquis, M Robertson, L Yu, M Thieme… - Nucleic acids …, 2021 - academic.oup.com
Transposable elements (TEs) have long been known to be major contributors to plant
evolution, adaptation and crop domestication. Stress-induced TE mobilization is of particular …

Genetic and environmental modulation of transposition shapes the evolutionary potential of Arabidopsis thaliana

P Baduel, B Leduque, A Ignace, I Gy, J Gil Jr, O Loudet… - Genome biology, 2021 - Springer
Background How species can adapt to abrupt environmental changes, particularly in the
absence of standing genetic variation, is poorly understood and a pressing question in the …

Heat stress-induced transposon activation correlates with 3D chromatin organization rearrangement in Arabidopsis

L Sun, Y Jing, X Liu, Q Li, Z Xue, Z Cheng… - Nature …, 2020 - nature.com
In higher eukaryotes, heterochromatin is mainly composed of transposable elements (TEs)
silenced by epigenetic mechanisms. But, the silencing of certain heterochromatin …

Twenty years of transposable element analysis in the Arabidopsis thaliana genome

H Quesneville - Mobile DNA, 2020 - Springer
Transposable elements (TEs) are mobile repetitive DNA sequences shown to be major
drivers of genome evolution. As the first plant to have its genome sequenced and analyzed …

Genetic and molecular mechanisms underlying root architecture and function under heat stress—A hidden story

M Tiwari, R Kumar, D Min… - Plant, Cell & …, 2022 - Wiley Online Library
Heat stress events are resulting in a significant negative impact on global food production.
The dynamics of cellular, molecular and physiological homoeostasis in aboveground parts …

Two-speed genome evolution drives pathogenicity in fungal pathogens of animals

T Wacker, N Helmstetter, D Wilson… - Proceedings of the …, 2023 - National Acad Sciences
The origins and evolution of virulence in amphibian-infecting chytrids Batrachochytrium
dendrobatidis (Bd) and Batrachochytrium salamandrivorans (Bsal) are largely unknown …

Relaxed purifying selection in autopolyploids drives transposable element over-accumulation which provides variants for local adaptation

P Baduel, L Quadrana, B Hunter, K Bomblies… - Nature …, 2019 - nature.com
Polyploidization is frequently associated with increased transposable element (TE) content.
However, what drives TE dynamics following whole genome duplication (WGD) and the …

Genome-wide analysis of heat stress-stimulated transposon mobility in the human fungal pathogen Cryptococcus deneoformans

A Gusa, V Yadav, C Roth, JD Williams… - Proceedings of the …, 2023 - National Acad Sciences
We recently reported transposon mutagenesis as a significant driver of spontaneous
mutations in the human fungal pathogen Cryptococcus deneoformans during murine …