Impact of residue accessible surface area on the prediction of protein secondary structures

A Momen-Roknabadi, M Sadeghi, H Pezeshk… - BMC …, 2008 - Springer
Background The problem of accurate prediction of protein secondary structure continues to
be one of the challenging problems in Bioinformatics. It has been previously suggested that …

From local structure to a global framework: recognition of protein folds

AP Joseph, AG de Brevern - Journal of The Royal …, 2014 - royalsocietypublishing.org
Protein folding has been a major area of research for many years. Nonetheless, the
mechanisms leading to the formation of an active biological fold are still not fully …

[HTML][HTML] Omics data analysis reveals the system-level constraint on cellular amino acid composition

Y Huang, Z Mao, Y Zhang, J Zhao, X Luan, K Wu… - Synthetic and Systems …, 2024 - Elsevier
Proteins play a pivotal role in coordinating the functions of organisms, essentially governing
their traits, as the dynamic arrangement of diverse amino acids leads to a multitude of folded …

[HTML][HTML] Impact of Wikipedia on citation trends

SA Marashi, SMA Hosseini-Nami, K Alishah… - EXCLI …, 2013 - ncbi.nlm.nih.gov
It has been suggested that the “visibility” of an article influences its citation count. More
specifically, it is believed that the social media can influence article citations. Here we tested …

Prediction of protein secondary structure using feature selection and analysis approach

Y Feng, H Lin, L Luo - Acta biotheoretica, 2014 - Springer
The prediction of the secondary structure of a protein from its amino acid sequence is an
important step towards the prediction of its three-dimensional structure. However, the …

[HTML][HTML] 酶蛋白质中8 类二级结构的识别

高苏娟 - Hans Journal of Biomedicine, 2021 - hanspub.org
酶是一种具有催化功能的蛋白质, 研究酶蛋白质中的二级结构对研究酶的结构及功能有重要作用
. 本文从酶蛋白质序列出发, 以位点氨基酸和20 种氨基酸n-gap 2 肽组分为参数 …

Protein Modelling and Surface Folding by Limiting the Degrees of Freedom

M Israelowitz, B Weyand, SWH Rizvi, C Gille… - … Modeling in Tissue …, 2012 - Springer
One aspect of tissue engineering represents modelling of the extracellular matrix of
connective tissue as the fiber network arrangement of the matrix determines its tensile …

Species specific amino acid sequence–protein local structure relationships: An analysis in the light of a structural alphabet

AG de Brevern, AP Joseph - Journal of theoretical biology, 2011 - Elsevier
Protein structure analysis and prediction methods are based on non-redundant data
extracted from the available protein structures, regardless of the species from which the …

[PDF][PDF] Computer Science Bioinformatics Track

D Kolev, N Bohrweg - liacs.leidenuniv.nl
Illnesses related to bacteria and viruses are the most common. But there is a third category
of illness. Those are the ones related to the malfunction of our own bio-molecular …

[引用][C] 基于打分函数的蛋白质二级结构的识别

冯永娥 - 生物数学学报, 2016