Using neutral, selected, and hitchhiker loci to assess connectivity of marine populations in the genomic era

PA Gagnaire, T Broquet, D Aurelle… - Evolutionary …, 2015 - Wiley Online Library
Estimating the rate of exchange of individuals among populations is a central concern to
evolutionary ecology and its applications to conservation and management. For instance …

Genome sequence and genetic diversity of European ash trees

ESA Sollars, AL Harper, LJ Kelly, CM Sambles… - Nature, 2017 - nature.com
Ash trees (genus Fraxinus, family Oleaceae) are widespread throughout the Northern
Hemisphere, but are being devastated in Europe by the fungus Hymenoscyphus fraxineus …

Principals about principal components in statistical genetics

F Abegaz, K Chaichoompu, E Génin… - Briefings in …, 2019 - academic.oup.com
Principal components (PCs) are widely used in statistics and refer to a relatively small
number of uncorrelated variables derived from an initial pool of variables, while explaining …

Marker–Trait Association Analysis of Iron and Zinc Concentration in Lentil (Lens culinaris Medik.) Seeds

H Khazaei, R Podder, CT Caron, SS Kundu… - The plant …, 2017 - Wiley Online Library
Lentil (Lens culinaris Medik.) seeds are relatively rich in iron (Fe) and zinc (Zn), making lentil
a potential crop to aid in the global battle against human micronutrient deficiency …

Genomic signatures of vegetable and oilseed allopolyploid Brassica juncea and genetic loci controlling the accumulation of glucosinolates

J Yang, J Wang, Z Li, X Li, Z He, L Zhang… - Plant biotechnology …, 2021 - Wiley Online Library
Allopolyploid Brassica juncea crops in Brassicaceae are becoming increasingly revitalized
as vegetables and oilseeds owing to wide adaptability and significant economic values …

Molecular markers for tolerance of European ash (Fraxinus excelsior) to dieback disease identified using Associative Transcriptomics

AL Harper, LV McKinney, LR Nielsen, L Havlickova… - Scientific reports, 2016 - nature.com
Tree disease epidemics are a global problem, impacting food security, biodiversity and
national economies. The potential for conservation and breeding in trees is hampered by …

Validation of an updated Associative Transcriptomics platform for the polyploid crop species Brassica napus by dissection of the genetic architecture of erucic acid …

L Havlickova, Z He, L Wang, S Langer… - The Plant …, 2018 - Wiley Online Library
An updated platform was developed to underpin association genetics studies in the
polyploid crop species Brassica napus (oilseed rape). Based on 1.92× 1012 bases of leaf …

Fast inference of individual admixture coefficients using geographic data

K Caye, F Jay, O Michel, O François - The Annals of Applied Statistics, 2018 - JSTOR
Accurately evaluating the distribution of genetic ancestry across geographic space is one of
the main questions addressed by evolutionary biologists. This question has been commonly …

Correlation between phenotypic antibiotic susceptibility and the resistome in Pseudomonas aeruginosa

M Jaillard, A van Belkum, KC Cady, D Creely… - International journal of …, 2017 - Elsevier
Genetic determinants of antibiotic resistance (AR) have been extensively investigated. High-
throughput sequencing allows for the assessment of the relationship between genotype and …

Validation of an Associative Transcriptomics platform in the polyploid crop species Brassica juncea by dissection of the genetic architecture of agronomic and quality …

AL Harper, Z He, S Langer, L Havlickova… - The Plant …, 2020 - Wiley Online Library
The development of more productive crops will be key to addressing the challenges that
climate change, population growth and diminishing resources pose to global food security …