RNA structural dynamics as captured by molecular simulations: a comprehensive overview

J Sponer, G Bussi, M Krepl, P Banáš, S Bottaro… - Chemical …, 2018 - ACS Publications
With both catalytic and genetic functions, ribonucleic acid (RNA) is perhaps the most
pluripotent chemical species in molecular biology, and its functions are intimately linked to …

HIV-1 antiretroviral drug therapy

EJ Arts, DJ Hazuda - Cold Spring Harbor …, 2012 - perspectivesinmedicine.cshlp.org
The most significant advance in the medical management of HIV-1 infection has been the
treatment of patients with antiviral drugs, which can suppress HIV-1 replication to …

Engineering precise sequence-defined polymers for advanced functions

Q Shi, Z Deng, M Hou, X Hu, S Liu - Progress in Polymer Science, 2023 - Elsevier
Unlike natural macromolecules (eg, nucleic acids and proteins) possessing precisely
defined molar mass, chain sequence, chirality, and topology, synthetic polymers are typically …

Targeting RNA with small molecules to capture opportunities at the intersection of chemistry, biology, and medicine

MD Disney - Journal of the American Chemical Society, 2019 - ACS Publications
The biology of healthy and disease-affected cells is often mediated by RNA structures,
desirable targets for small molecule chemical probes and lead medicines. Although …

The design, synthesis, and evaluation of molecules that enable or enhance cellular uptake: peptoid molecular transporters

PA Wender, DJ Mitchell… - Proceedings of the …, 2000 - National Acad Sciences
Certain proteins contain subunits that enable their active translocation across the plasma
membrane into cells. In the specific case of HIV-1, this subunit is the basic domain Tat49–57 …

Strategies in the design of antiviral drugs

E De Clercq - Nature Reviews drug discovery, 2002 - nature.com
A decade ago, just five drugs were licensed for the treatment of viral infections. Since then,
greater understanding of viral life cycles, prompted in particular by the need to combat …

Single-nucleotide polymorphisms can cause different structural folds of mRNA

LX Shen, JP Basilion… - Proceedings of the …, 1999 - National Acad Sciences
Single-nucleotide polymorphisms (SNPs) are the most common type of genetic variation in
man. Genes containing one or more SNPs can give rise to two or more allelic forms of …

Tackling tat

J Karn - Journal of molecular biology, 1999 - Elsevier
Activation of cellular genes typically involves control of transcription initiation by DNA-
binding regulatory proteins. The human immunodeficiency virus transactivator protein, Tat …

New developments in anti-HIV chemotherapy

E Clercq - Current medicinal chemistry, 2001 - ingentaconnect.com
Virtually all the compounds that are currently used, or under advanced clinical trial, for the
treatment of HIV infections, belong to one of the following classes:(i) nucleoside/nucleotide …

Targeting RNA with small-molecule drugs: therapeutic promise and chemical challenges

J Gallego, G Varani - Accounts of chemical research, 2001 - ACS Publications
Researchers' increasing awareness of the essential role played by RNA in many biological
processes and in the progression of disease makes the discovery of new RNA targets an …