A multi-tissue atlas of regulatory variants in cattle

S Liu, Y Gao, O Canela-Xandri, S Wang, Y Yu, W Cai… - Nature …, 2022 - nature.com
Abstract Characterization of genetic regulatory variants acting on livestock gene expression
is essential for interpreting the molecular mechanisms underlying traits of economic value …

Parental effects on epigenetic programming in gametes and embryos of dairy cows

C Wu, MA Sirard - Frontiers in Genetics, 2020 - frontiersin.org
The bovine represents an important agriculture species and dairy breeds have experienced
intense genetic selection over the last decades. The selection of breeders focused initially …

[HTML][HTML] Paternal transgenerational nutritional epigenetic effect: A new insight into nutritional manipulation to reduce the use of antibiotics in animal feeding

X Li, M Wang, S Liu, X Chen, Y Qiao, X Yang, J Yao… - Animal Nutrition, 2022 - Elsevier
The use of antibiotics in animal feeding has been banned in many countries because of
increasing concerns about the development of bacterial resistance to antibiotics and …

GWAS and fine-mapping of livability and six disease traits in Holstein cattle

E Freebern, DJA Santos, L Fang, J Jiang… - BMC genomics, 2020 - Springer
Background Health traits are of significant economic importance to the dairy industry due to
their effects on milk production and associated treatment costs. Genome-wide association …

Functional annotation of the cattle genome through systematic discovery and characterization of chromatin states and butyrate-induced variations

L Fang, S Liu, M Liu, X Kang, S Lin, B Li, EE Connor… - BMC biology, 2019 - Springer
Background The functional annotation of genomes, including chromatin accessibility and
modifications, is important for understanding and effectively utilizing the increased amount of …

Genome-wide association study of milk and reproductive traits in dual-purpose Xinjiang Brown cattle

J Zhou, L Liu, CJ Chen, M Zhang, X Lu, Z Zhang… - BMC genomics, 2019 - Springer
Background Dual-purpose cattle are more adaptive to environmental challenges than single-
purpose dairy or beef cattle. Balance among milk, reproductive, and mastitis resistance traits …

A comprehensive catalogue of regulatory variants in the cattle transcriptome

S Liu, Y Gao, O Canela-Xandri, S Wang, Y Yu, W Cai… - BioRxiv, 2020 - biorxiv.org
Abstract Characterization of genetic regulatory variants acting on the transcriptome of
livestock is essential for interpreting the molecular mechanisms underlying traits of …

Breed-and trait-specific associations define the genetic architecture of calving performance traits in cattle

DC Purfield, RD Evans, DP Berry - Journal of animal science, 2020 - academic.oup.com
Reducing the incidence of both the degree of assistance required at calving, as well as the
extent of perinatal mortality (PM) has both economic and societal benefits. The existence of …

Identification of candidate variants associated with bone weight using whole genome sequence in beef cattle

Q Niu, T Zhang, L Xu, T Wang, Z Wang, B Zhu… - Frontiers in …, 2021 - frontiersin.org
Bone weight is critical to affect body conformation and stature in cattle. In this study, we
conducted a genome-wide association study for bone weight in Chinese Simmental beef …

Genome-wide association study for carcass quality traits and growth in purebred and crossbred pigs

M Bergamaschi, C Maltecca, J Fix… - Journal of Animal …, 2020 - academic.oup.com
Carcass quality traits such as back fat (BF), loin depth (LD), and ADG are of extreme
economic importance for the swine industry. This study aimed to (i) estimate the genetic …