The practice and promise of temporal genomics for measuring evolutionary responses to global change

RD Clark, KA Catalano, KS Fitz… - Molecular Ecology …, 2023 - Wiley Online Library
Understanding the evolutionary consequences of anthropogenic change is imperative for
estimating long‐term species resilience. While contemporary genomic data can provide us …

Ancient DNA methods improve forensic DNA profiling of Korean War and World War II unknowns

EI Zavala, JT Thomas, K Sturk-Andreaggi… - Genes, 2022 - mdpi.com
The integration of massively parallel sequencing (MPS) technology into forensic casework
has been of particular benefit to the identification of unknown military service members …

Artefact Profiling: Panomics Approaches for Understanding the Materiality of Written Artefacts

M Creydt, M Fischer - Molecules, 2023 - mdpi.com
This review explains the strategies behind genomics, proteomics, metabolomics,
metallomics and isotopolomics approaches and their applicability to written artefacts. The …

Tracking population structure and phenology through time using ancient genomes from waterlogged white oak wood

S Wagner, A Seguin‐Orlando, JC Leplé… - Molecular …, 2024 - Wiley Online Library
Whole genome characterizations of crop plants based on ancient DNA have provided
unique keys for a better understanding of the evolutionary origins of modern cultivars, the …

Ancient metagenomic studies: considerations for the wider scientific community

C Der Sarkissian, IM Velsko, AK Fotakis, ÅJ Vågene… - Msystems, 2021 - Am Soc Microbiol
Like modern metagenomics, ancient metagenomics is a highly data-rich discipline, with the
added challenge that the DNA of interest is degraded and, depending on the sample type, in …

Quantifying and reducing cross‐contamination in single‐and multiplex hybridization capture of ancient DNA

EI Zavala, A Aximu‐Petri, J Richter… - Molecular Ecology …, 2022 - Wiley Online Library
The use of hybridization capture has enabled a massive upscaling in sample sizes for
ancient DNA studies, allowing the analysis of hundreds of skeletal remains or sediments in …

Ancient mitochondrial genomes unveil the origins and evolutionary history of New Zealand's enigmatic takahē and moho

AJF Verry, E Mas‐Carrió, GC Gibb, L Dutoit… - Molecular …, 2024 - Wiley Online Library
Many avian species endemic to Aotearoa New Zealand were driven to extinction or reduced
to relict populations following successive waves of human arrival, due to hunting, habitat …

Imputed genomes of historical horses provide insights into modern breeding

ET Todd, A Fromentier, R Sutcliffe, YRH Collin… - Iscience, 2023 - cell.com
Historical genomes can provide important insights into recent genomic changes in horses,
especially the development of modern breeds. In this study, we characterized 8.7 million …

Life-history traits drive spatial genetic structuring in Dinaric cave spiders

M Pavlek, J Gauthier, V Tonzo, J Bilat… - Frontiers in ecology …, 2022 - frontiersin.org
The subterranean ecosystem exerts strong selection pressures on the organisms that thrive
in it. In response, obligate cave-dwellers have developed a series of morphological …

Improving the extraction of ancient Yersinia pestis genomes from the dental pulp

P Clavel, L Louis, C Der Sarkissian, C Thèves, C Gillet… - Iscience, 2023 - cell.com
Ancient DNA preserved in the dental pulp offers the opportunity to characterize the genome
of some of the deadliest pathogens in human history. However, while DNA capture …