[HTML][HTML] GWAS: fast-forwarding gene identification and characterization in temperate cereals: lessons from barley–a review

AM Alqudah, A Sallam, PS Baenziger… - Journal of advanced …, 2020 - Elsevier
Understanding the genetic complexity of traits is an important objective of small grain
temperate cereals yield and adaptation improvements. Bi-parental quantitative trait loci …

NASP: an accurate, rapid method for the identification of SNPs in WGS datasets that supports flexible input and output formats

JW Sahl, D Lemmer, J Travis, JM Schupp… - Microbial …, 2016 - microbiologyresearch.org
Whole-genome sequencing (WGS) of bacterial isolates has become standard practice in
many laboratories. Applications for WGS analysis include phylogeography and molecular …

Shotgun metagenomics reveals an enrichment of potentially cross-reactive bacterial epitopes in ankylosing spondylitis patients, as well as the effects of TNFi therapy …

J Yin, PR Sternes, M Wang, J Song… - Annals of the …, 2020 - ard.bmj.com
Objectives Diverse evidence including clinical, genetic and microbiome studies support a
major role of the gut microbiome in the common immune-mediated arthropathy, ankylosing …

[HTML][HTML] The evolutionary process of invasion in the fall armyworm (Spodoptera frugiperda)

S Yainna, WT Tay, K Durand, E Fiteni, F Hilliou… - Scientific Reports, 2022 - nature.com
The fall armyworm (FAW; S podoptera frugiperda) is one of the major agricultural pest
insects. FAW is native to the Americas, and its invasion was first reported in West Africa in …

[HTML][HTML] Genome-wide association analysis reveals new insights into the genetic architecture of defensive, agro-morphological and quality-related traits in cassava

IY Rabbi, SI Kayondo, G Bauchet, M Yusuf… - Plant Molecular …, 2022 - Springer
Cassava (Manihot esculenta) is one of the most important starchy root crops in the tropics
due to its adaptation to marginal environments. Genetic progress in this clonally propagated …

[HTML][HTML] Genome-wide association mapping and genomic prediction for CBSD resistance in Manihot esculenta

SI Kayondo, D Pino Del Carpio, R Lozano, A Ozimati… - Scientific Reports, 2018 - nature.com
Abstract Cassava (Manihot esculenta Crantz) is an important security crop that faces severe
yield loses due to cassava brown streak disease (CBSD). Motivated by the slow progress of …

[HTML][HTML] Host-plant adaptation as a driver of incipient speciation in the fall armyworm (Spodoptera frugiperda)

E Fiteni, K Durand, S Gimenez, RL Meagher Jr… - BMC Ecology and …, 2022 - Springer
Background Divergent selection on host-plants is one of the main evolutionary forces driving
ecological speciation in phytophagous insects. The ecological speciation might be …

A lakehouse architecture for the management and analysis of heterogeneous data for biomedical research and mega-biobanks

E Begoli, I Goethert, K Knight - 2021 IEEE International …, 2021 - ieeexplore.ieee.org
Data Lakehouse is a new paradigm in data architectures that embodies and integrates
already established concepts for the systematic management of disparate, large-scale data …

Genetic variation in ALDH4A1 is associated with muscle health over the lifespan and across species

O Villa, NL Stuhr, C Yen, EM Crimmins, TE Arpawong… - Elife, 2022 - elifesciences.org
The influence of genetic variation on the aging process, including the incidence and severity
of age-related diseases, is complex. Here, we define the evolutionarily conserved …

[HTML][HTML] Genome-wide association analysis of Mexican bread wheat landraces for resistance to yellow and stem rust

P Vikram, D Sehgal, A Sharma, S Bhavani, P Gupta… - PloS one, 2021 - journals.plos.org
Deploying under-utilized landraces in wheat breeding has been advocated to accelerate
genetic gains in current era of genomics assisted breeding. Mexican bread wheat landraces …