[HTML][HTML] Linking plant secondary metabolites and plant microbiomes: a review
Z Pang, J Chen, T Wang, C Gao, Z Li, L Guo… - Frontiers in plant …, 2021 - frontiersin.org
Plant secondary metabolites (PSMs) play many roles including defense against pathogens,
pests, and herbivores; response to environmental stresses, and mediating organismal …
pests, and herbivores; response to environmental stresses, and mediating organismal …
A practical guide to amplicon and metagenomic analysis of microbiome data
Advances in high-throughput sequencing (HTS) have fostered rapid developments in the
field of microbiome research, and massive microbiome datasets are now being generated …
field of microbiome research, and massive microbiome datasets are now being generated …
microeco: an R package for data mining in microbial community ecology
C Liu, Y Cui, X Li, M Yao - FEMS microbiology ecology, 2021 - academic.oup.com
ABSTRACT A large amount of sequencing data is produced in microbial community ecology
studies using the high-throughput sequencing technique, especially amplicon-sequencing …
studies using the high-throughput sequencing technique, especially amplicon-sequencing …
Soil plastispheres as hotspots of antibiotic resistance genes and potential pathogens
In the Anthropocene, increasing pervasive plastic pollution is creating a new environmental
compartment, the plastisphere. How the plastisphere affects microbial communities and …
compartment, the plastisphere. How the plastisphere affects microbial communities and …
iNAP: an integrated network analysis pipeline for microbiome studies
Integrated network analysis pipeline (iNAP) is an online analysis pipeline for generating and
analyzing comprehensive ecological networks in microbiome studies. It is implemented in …
analyzing comprehensive ecological networks in microbiome studies. It is implemented in …
[HTML][HTML] Gut microbiome of multiple sclerosis patients and paired household healthy controls reveal associations with disease risk and course
X Zhou, R Baumann, X Gao, M Mendoza, S Singh… - Cell, 2022 - cell.com
Changes in gut microbiota have been associated with several diseases. Here, the
International Multiple Sclerosis Microbiome Study (iMSMS) studied the gut microbiome of …
International Multiple Sclerosis Microbiome Study (iMSMS) studied the gut microbiome of …
Using MicrobiomeAnalyst for comprehensive statistical, functional, and meta-analysis of microbiome data
MicrobiomeAnalyst is an easy-to-use, web-based platform for comprehensive analysis of
common data outputs generated from current microbiome studies. It enables researchers …
common data outputs generated from current microbiome studies. It enables researchers …
[HTML][HTML] Fungal-bacterial diversity and microbiome complexity predict ecosystem functioning
The soil microbiome is highly diverse and comprises up to one quarter of Earth's diversity.
Yet, how such a diverse and functionally complex microbiome influences ecosystem …
Yet, how such a diverse and functionally complex microbiome influences ecosystem …
[HTML][HTML] Mother-to-infant microbiota transmission and infant microbiota development across multiple body sites
D Bogaert, GJ Van Beveren, EM de Koff, PL Parga… - Cell Host & Microbe, 2023 - cell.com
Early-life microbiota seeding and subsequent development is crucial to future health.
Cesarean-section (CS) birth, as opposed to vaginal delivery, affects early mother-to-infant …
Cesarean-section (CS) birth, as opposed to vaginal delivery, affects early mother-to-infant …
[HTML][HTML] A quantitative framework reveals ecological drivers of grassland microbial community assembly in response to warming
Unraveling the drivers controlling community assembly is a central issue in ecology.
Although it is generally accepted that selection, dispersal, diversification and drift are major …
Although it is generally accepted that selection, dispersal, diversification and drift are major …