Molecular and evolutionary processes generating variation in gene expression

MS Hill, P Vande Zande, PJ Wittkopp - Nature Reviews Genetics, 2021 - nature.com
Heritable variation in gene expression is common within and between species. This
variation arises from mutations that alter the form or function of molecular gene regulatory …

Gene balance hypothesis: connecting issues of dosage sensitivity across biological disciplines

JA Birchler, RA Veitia - … of the National Academy of Sciences, 2012 - National Acad Sciences
We summarize, in this review, the evidence that genomic balance influences gene
expression, quantitative traits, dosage compensation, aneuploid syndromes, population …

The evolution, evolvability and engineering of gene regulatory DNA

ED Vaishnav, CG de Boer, J Molinet, M Yassour, L Fan… - Nature, 2022 - nature.com
Mutations in non-coding regulatory DNA sequences can alter gene expression, organismal
phenotype and fitness,–. Constructing complete fitness landscapes, in which DNA …

[图书][B] Organism and environment: ecological development, niche construction, and adaptation

SE Sultan - 2015 - books.google.com
Over the past decade, advances in both molecular developmental biology and evolutionary
ecology have made possible a new understanding of organisms as dynamic systems …

From RNA-seq reads to differential expression results

A Oshlack, MD Robinson, MD Young - Genome biology, 2010 - Springer
From RNA-seq reads to differential expression results | Genome Biology Skip to main content
SpringerLink Account Menu Find a journal Publish with us Track your research Search Cart …

Detecting signatures of selection on gene expression

PD Price, DH Palmer Droguett, JA Taylor… - Nature Ecology & …, 2022 - nature.com
A substantial amount of phenotypic diversity results from changes in gene expression levels
and patterns. Understanding how the transcriptome evolves is therefore a key priority in …

Integrated phenotypes: understanding trait covariation in plants and animals

WS Armbruster, C Pélabon… - … Transactions of the …, 2014 - royalsocietypublishing.org
Integration and modularity refer to the patterns and processes of trait interaction and
independence. Both terms have complex histories with respect to both conceptualization …

Spontaneous mutation accumulation studies in evolutionary genetics

DL Halligan, PD Keightley - Annual Review of Ecology …, 2009 - annualreviews.org
Mutation accumulation (MA) experiments, in which mutations are allowed to drift to fixation in
inbred lines, have been a principal way of studying the rates and properties of new …

Dosage, duplication, and diploidization: clarifying the interplay of multiple models for duplicate gene evolution over time

GC Conant, JA Birchler, JC Pires - Current opinion in plant biology, 2014 - Elsevier
Highlights•Dosage balance is fluid and will change over time.•Duplicate genes are
preserved by interplay of multiple overlapping mechanisms.•Distinguishing duplicate gene …

Unifying and testing models of sexual selection

H Kokko, MD Jennions, R Brooks - Annu. Rev. Ecol. Evol. Syst., 2006 - annualreviews.org
Sexual reproduction is associated with the evolution of anisogamy and sperm-producing
males and egg-laying females. The ensuing competition for mates has led to sexual …