A review of molecular representation in the age of machine learning

DS Wigh, JM Goodman… - Wiley Interdisciplinary …, 2022 - Wiley Online Library
Research in chemistry increasingly requires interdisciplinary work prompted by, among
other things, advances in computing, machine learning, and artificial intelligence. Everyone …

SELFIES and the future of molecular string representations

M Krenn, Q Ai, S Barthel, N Carson, A Frei, NC Frey… - Patterns, 2022 - cell.com
Artificial intelligence (AI) and machine learning (ML) are expanding in popularity for broad
applications to challenging tasks in chemistry and materials science. Examples include the …

Extending machine learning beyond interatomic potentials for predicting molecular properties

N Fedik, R Zubatyuk, M Kulichenko, N Lubbers… - Nature Reviews …, 2022 - nature.com
Abstract Machine learning (ML) is becoming a method of choice for modelling complex
chemical processes and materials. ML provides a surrogate model trained on a reference …

Predictive chemistry: machine learning for reaction deployment, reaction development, and reaction discovery

Z Tu, T Stuyver, CW Coley - Chemical science, 2023 - pubs.rsc.org
The field of predictive chemistry relates to the development of models able to describe how
molecules interact and react. It encompasses the long-standing task of computer-aided …

Data-driven multi-objective optimization tactics for catalytic asymmetric reactions using bisphosphine ligands

JJ Dotson, L van Dijk, JC Timmerman… - Journal of the …, 2022 - ACS Publications
Optimization of the catalyst structure to simultaneously improve multiple reaction objectives
(eg, yield, enantioselectivity, and regioselectivity) remains a formidable challenge. Herein …

Dataset design for building models of chemical reactivity

P Raghavan, BC Haas, ME Ruos, J Schleinitz… - ACS Central …, 2023 - ACS Publications
Models can codify our understanding of chemical reactivity and serve a useful purpose in
the development of new synthetic processes via, for example, evaluating hypothetical …

Rapid planning and analysis of high-throughput experiment arrays for reaction discovery

B Mahjour, R Zhang, Y Shen, A McGrath… - Nature …, 2023 - nature.com
High-throughput experimentation (HTE) is an increasingly important tool in reaction
discovery. While the hardware for running HTE in the chemical laboratory has evolved …

Real-time prediction of 1 H and 13 C chemical shifts with DFT accuracy using a 3D graph neural network

Y Guan, SVS Sowndarya, LC Gallegos, PCS John… - Chemical …, 2021 - pubs.rsc.org
Nuclear magnetic resonance (NMR) is one of the primary techniques used to elucidate the
chemical structure, bonding, stereochemistry, and conformation of organic compounds. The …

Multi-objective goal-directed optimization of de novo stable organic radicals for aqueous redox flow batteries

SS SV, JN Law, CE Tripp, D Duplyakin… - Nature Machine …, 2022 - nature.com
Advances in the field of goal-directed molecular optimization offer the promise of finding
feasible candidates for even the most challenging molecular design applications. One …

When machine learning meets molecular synthesis

JCA Oliveira, J Frey, SQ Zhang, LC Xu, X Li, SW Li… - Trends in Chemistry, 2022 - cell.com
The recent synergy of machine learning (ML) with molecular synthesis has emerged as an
increasingly powerful platform in organic synthesis and catalysis. This merger has set the …