Rethinking the marine carbon cycle: factoring in the multifarious lifestyles of microbes

AZ Worden, MJ Follows, SJ Giovannoni, S Wilken… - Science, 2015 - science.org
BACKGROUND Marine ecosystems are composed of a diverse array of life forms, the
majority of which are unicellular—archaea, bacteria, and eukaryotes. The power of these …

Marine protists are not just big bacteria

PJ Keeling, J Del Campo - Current Biology, 2017 - cell.com
The study of marine microbial ecology has been completely transformed by molecular and
genomic data: after centuries of relative neglect, genomics has revealed the surprising …

Mixotrophic haptophytes are key bacterial grazers in oligotrophic coastal waters

F Unrein, JM Gasol, F Not, I Forn… - The ISME journal, 2014 - academic.oup.com
Grazing rate estimates indicate that approximately half of the bacterivory in oligotrophic
oceans is due to mixotrophic flagellates (MFs). However, most estimations have considered …

Chimeric origins of ochrophytes and haptophytes revealed through an ancient plastid proteome

RG Dorrell, G Gile, G Mccallum, R Méheust… - elife, 2017 - elifesciences.org
Plastids are supported by a wide range of proteins encoded within the nucleus and imported
from the cytoplasm. These plastid-targeted proteins may originate from the endosymbiont …

Transcriptome reconstruction and functional analysis of eukaryotic marine plankton communities via high-throughput metagenomics and metatranscriptomics

A Vorobev, M Dupouy, Q Carradec… - Genome …, 2020 - genome.cshlp.org
Large-scale metagenomic and metatranscriptomic data analyses are often restricted by their
gene-centric approach, limiting the ability to understand organismal and community biology …

Updating algal evolutionary relationships through plastid genome sequencing: did alveolate plastids emerge through endosymbiosis of an ochrophyte?

T Ševčíková, A Horák, V Klimeš, V Zbránková… - Scientific reports, 2015 - nature.com
Algae with secondary plastids of a red algal origin, such as ochrophytes (photosynthetic
stramenopiles), are diverse and ecologically important, yet their evolutionary history remains …

Genomes and gene expression across light and productivity gradients in eastern subtropical Pacific microbial communities

CL Dupont, JP McCrow, R Valas, A Moustafa… - The ISME …, 2015 - academic.oup.com
Transitions in community genomic features and biogeochemical processes were examined
in surface and subsurface chlorophyll maximum (SCM) microbial communities across a …

Picomonas judraskeda Gen. Et Sp. Nov.: The First Identified Member of the Picozoa Phylum Nov., a Widespread Group of Picoeukaryotes, Formerly Known as ' …

R Seenivasan, N Sausen, LK Medlin, M Melkonian - PloS one, 2013 - journals.plos.org
In 2007, a novel, putatively photosynthetic picoeukaryotic lineage, the 'picobiliphytes', with
no known close eukaryotic relatives, was reported from 18S environmental clone library …

[PDF][PDF] Assessment of fungal diversity in the environment using metagenomics: a decade in review

S Cuadros-Orellana, LR Leite, A Smith… - Fungal Genomics & …, 2013 - researchgate.net
Fungi are ubiquitous inhabitants of soil and aquatic environments, and they establish and
maintain either parasitic or symbiotic relationships with animals and plants. They are major …

Highly-resolved interannual phytoplankton community dynamics of the coastal Northwest Atlantic

BM Robicheau, J Tolman, EM Bertrand… - ISME …, 2022 - academic.oup.com
Microbial observatories can track phytoplankton at frequencies that resolve monthly,
seasonal, and multiyear trends in environmental change from short-lived events. Using 4 …