[HTML][HTML] Humoral immune escape by current SARS-CoV-2 variants BA. 2.86 and JN. 1, December 2023

LM Jeworowski, B Mühlemann, F Walper… - …, 2024 - eurosurveillance.org
Variant BA. 2.86 and its descendant, JN. 1, of SARS-CoV-2 are rising in incidence across
Europe and globally. We isolated recent JN. 1, BA. 2.86, EG. 5, XBB. 1.5 and earlier variants …

[HTML][HTML] Virological characteristics of the SARS-CoV-2 BA. 2.86 variant

T Tamura, K Mizuma, H Nasser, S Deguchi… - Cell Host & Microbe, 2024 - cell.com
In late 2023, several SARS-CoV-2 XBB descendants, notably EG. 5.1, were predominant
worldwide. However, a distinct SARS-CoV-2 lineage, the BA. 2.86 variant, also emerged …

Molecular and structural insights into SARS-CoV-2 evolution: from BA. 2 to XBB subvariants

H Yajima, T Nomai, K Okumura, K Maenaka… - Mbio, 2024 - journals.asm.org
Due to the incessant emergence of various SARS-CoV-2 variants with enhanced fitness in
the human population, controlling the COVID-19 pandemic has been challenging …

Evolution of the SARS-CoV-2 Omicron Variants: Genetic Impact on Viral Fitness

W Liu, Z Huang, J Xiao, Y Wu, N Xia, Q Yuan - Viruses, 2024 - mdpi.com
Over the last three years, the pandemic of COVID-19 has had a significant impact on
people's lives and the global economy. The incessant emergence of variant strains has …

[HTML][HTML] AlphaFold2 Modeling and Molecular Dynamics Simulations of the Conformational Ensembles for the SARS-CoV-2 Spike Omicron JN. 1, KP. 2 and KP. 3 …

N Raisinghani, M Alshahrani, G Gupta, G Verkhivker - Viruses, 2024 - mdpi.com
The most recent wave of SARS-CoV-2 Omicron variants descending from BA. 2 and BA.
2.86 exhibited improved viral growth and fitness due to convergent evolution of functional …

Phenotypic evolution of SARS-CoV-2 spike during the COVID-19 pandemic

W Furnon, VM Cowton, G De Lorenzo, R Orton… - Nature …, 2025 - nature.com
SARS-CoV-2 variants are mainly defined by mutations in their spike. It is therefore critical to
understand how the evolutionary trajectories of spike affect virus phenotypes. So far, it has …

Structural basis for receptor-binding domain mobility of the spike in SARS-CoV-2 BA. 2.86 and JN. 1

H Yajima, Y Anraku, Y Kaku, KT Kimura… - Nature …, 2024 - nature.com
Abstract Since 2019, SARS-CoV-2 has undergone mutations, resulting in pandemic and
epidemic waves. The SARS-CoV-2 spike protein, crucial for cellular entry, binds to the ACE2 …

Omicron-specific ultra-potent SARS-CoV-2 neutralizing antibodies targeting the N1/N2 loop of Spike N-terminal domain

X Niu, Z Li, J Wang, F Jian, Y Yu, W Song… - Emerging Microbes & …, 2024 - Taylor & Francis
ABSTRACT A multitude of functional mutations continue to emerge on the N-terminal
domain (NTD) of the spike protein in SARS-CoV-2 Omicron subvariants. Understanding the …

Virological characteristics correlating with SARS-CoV-2 spike protein fusogenicity

MSTM Begum, K Ichihara, O Takahashi… - Frontiers in …, 2024 - frontiersin.org
Introduction The severe acute respiratory syndrome coronavirus (SARS-CoV-2) spike (S)
protein is essential in mediating membrane fusion of the virus with the target cells. Several …

Atomistic Prediction of Structures, Conformational Ensembles and Binding Energetics for the SARS-CoV-2 Spike JN. 1, KP. 2 and KP. 3 Variants Using AlphaFold2 …

N Raisinghani, M Alshahrani, G Gupta, G Verkhivker - bioRxiv, 2024 - biorxiv.org
The most recent wave of SARS-CoV-2 Omicron variants descending from BA. 2 and BA.
2.86 exhibited improved viral growth and fitness due to convergent evolution of functional …