Half a century of genetic interaction between farmed and wild Atlantic salmon: status of knowledge and unanswered questions

KA Glover, MF Solberg, P McGinnity, K Hindar… - Fish and …, 2017 - Wiley Online Library
Atlantic salmon (Salmo salar) is one of the best researched fishes, and its aquaculture plays
a global role in the blue revolution. However, since the 1970s, tens of millions of farmed …

Genomic, transcriptomic and epigenomic tools to study the domestication of plants and animals: a field guide for beginners

J Barrera-Redondo, D Piñero, LE Eguiarte - Frontiers in Genetics, 2020 - frontiersin.org
In the last decade, genomics and the related fields of transcriptomics and epigenomics have
revolutionized the study of the domestication process in plants and animals, leading to new …

Applications in the search for genomic selection signatures in fish

ME López, R Neira, JM Yáñez - Frontiers in genetics, 2015 - frontiersin.org
Selection signatures are genomic regions harboring DNA sequences functionally involved
in the genetic variation of traits subject to selection. Selection signatures have been …

The complete chloroplast genome provides insight into the evolution and polymorphism of Panax ginseng

Y Zhao, J Yin, H Guo, Y Zhang, W Xiao, C Sun… - Frontiers in plant …, 2015 - frontiersin.org
Panax ginseng CA Meyer (P. ginseng) is an important medicinal plant and is often used in
traditional Chinese medicine. With next generation sequencing (NGS) technology, we …

Major gene expression changes and epigenetic remodelling in Nile tilapia muscle after just one generation of domestication

I Konstantinidis, P Sætrom, R Mjelle, AV Nedoluzhko… - Epigenetics, 2020 - Taylor & Francis
The historically recent domestication of fishes has been essential to meet the protein
demands of a growing human population. Selection for traits of interest during domestication …

Comparing genomic signatures of domestication in two Atlantic salmon (Salmo salar L.) populations with different geographical origins

ME López, L Benestan, JS Moore… - Evolutionary …, 2019 - Wiley Online Library
Selective breeding and genetic improvement have left detectable signatures on the
genomes of domestic species. The elucidation of such signatures is fundamental for …

Population genomic analyses of early‐phase Atlantic Salmon (Salmo salar) domestication/captive breeding

H Mäkinen, A Vasemägi, P McGinnity… - Evolutionary …, 2015 - Wiley Online Library
Domestication can have adverse genetic consequences, which may reduce the fitness of
individuals once released back into the wild. Many wild A tlantic salmon (S almo salar L.) …

Multiple selection signatures in farmed atlantic salmon adapted to different environments across hemispheres

ME López, T Linderoth, A Norris, JP Lhorente… - Frontiers in …, 2019 - frontiersin.org
Domestication of Atlantic salmon started approximately 40 years ago, using artificial
selection through genetic improvement programs. Selection is likely to have imposed …

A genome scan for selection signatures comparing farmed Atlantic salmon with two wild populations: Testing colocalization among outlier markers, candidate genes …

L Liu, KP Ang, JAK Elliott, MP Kent… - Evolutionary …, 2017 - Wiley Online Library
Comparative genome scans can be used to identify chromosome regions, but not traits, that
are putatively under selection. Identification of targeted traits may be more likely in recently …

[HTML][HTML] Evidence of recent signatures of selection during domestication in an Atlantic salmon population

AP Gutierrez, JM Yáñez, WS Davidson - Marine genomics, 2016 - Elsevier
Selective breeding practices in Atlantic salmon aquaculture have been carried out
intensively since the 1970s. Along with the phenotypic improvement of fish, we expect to …