Performance and application of 16S rRNA gene cycle sequencing for routine identification of bacteria in the clinical microbiology laboratory

DL Church, L Cerutti, A Gürtler, T Griener… - Clinical microbiology …, 2020 - Am Soc Microbiol
This review provides a state-of-the-art description of the performance of Sanger cycle
sequencing of the 16S rRNA gene for routine identification of bacteria in the clinical …

Microbiology, genomics, and clinical significance of the Pseudomonas fluorescens species complex, an unappreciated colonizer of humans

BS Scales, RP Dickson, JJ LiPuma… - Clinical microbiology …, 2014 - Am Soc Microbiol
Pseudomonas fluorescens is not generally considered a bacterial pathogen in humans;
however, multiple culture-based and culture-independent studies have identified it at low …

Molecular signatures and phylogenomic analysis of the genus Burkholderia: proposal for division of this genus into the emended genus Burkholderia containing pathogenic …

A Sawana, M Adeolu, RS Gupta - Frontiers in genetics, 2014 - frontiersin.org
The genus Burkholderia contains large number of diverse species which include many
clinically important organisms, phytopathogens, as well as environmental species. However …

Phylogenomics and systematics in Pseudomonas

M Gomila, A Peña, M Mulet, J Lalucat… - Frontiers in …, 2015 - frontiersin.org
The genus Pseudomonas currently contains 144 species, making it the genus of Gram-
negative bacteria that contains the largest number of species. Currently, multilocus …

DNA sequence‐based analysis of the Pseudomonas species

M Mulet, J Lalucat… - Environmental …, 2010 - Wiley Online Library
Partial sequences of four core 'housekeeping'genes (16S rRNA, gyrB, rpoB and rpoD) of the
type strains of 107 Pseudomonas species were analysed in order to obtain a …

Common Features of Environmental and Potentially Beneficial Plant-Associated Burkholderia

ZR Suárez-Moreno, J Caballero-Mellado… - Microbial ecology, 2012 - Springer
The genus Burkholderia comprises more than 60 species isolated from a wide range of
niches. Although they have been shown to be diverse and ubiquitously distributed, most …

Burkholderia glumae: next major pathogen of rice?

JH Ham, RA Melanson, MC Rush - Molecular plant pathology, 2011 - Wiley Online Library
Burkholderia glumae causes bacterial panicle blight of rice, which is an increasingly
important disease problem in global rice production. Toxoflavin and lipase are known to be …

A side by side comparison of Bruker Biotyper and VITEK MS: utility of MALDI-TOF MS technology for microorganism identification in a public health reference …

S Lévesque, PJ Dufresne, H Soualhine, MC Domingo… - PloS one, 2015 - journals.plos.org
Matrix-assisted laser desorption ionization–time of flight mass spectrometry (MALDI-TOF
MS) has emerged as a rapid, highly accurate, and cost-effective method for routine …

Contrasting recombination patterns and demographic histories of the plant pathogen Ralstonia solanacearum inferred from MLSA

E Wicker, P Lefeuvre, JC de Cambiaire… - The ISME …, 2012 - academic.oup.com
We used multilocus sequence analysis (MLSA) on a worldwide collection of the plant
pathogenic Ralstonia solanacearum (Betaproteobacteria) to retrace its complex evolutionary …

[图书][B] Molecular detection of human bacterial pathogens

D Liu - 2011 - books.google.com
As more original molecular protocols and subsequent modifications are described in the
literature, it has become difficult for those not directly involved in the development of these …